Transcript Information: R_Transcript_190331.p1


Annotated TAIR IDAT1G54520.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20363565-20365874 | Forward length=391
E-Value1.1E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.718526099639
Replicate 21.3401893882743
Replicate 30.73106609349423
Condition 2: 8 Hour
Replicate 11.8234154747949
Replicate 21.9030537737179
Replicate 32.317226887709
Condition 3: 24 Hour
Replicate 13.6634798767613
Replicate 21.4077824823773
Replicate 32.0956312998093


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_190331.p1 GENE.R_Transcript_190331~~R_Transcript_190331.p1 ORF type:5prime_partial len:94 (-),score=19.28,DUF1517|PF07466.7|2.1e-29 R_Transcript_190331:300-581(-)
GGCATTGAGGATGGAGAGAAGAAGTTCAACCAACTATCTATTGAGGAACGAGGGAAATTTGATGAAGAAACATTGGTCAATGTGAACAACATAAAGAGACAGAACACAAGAAGCATGAGAGCCACTGGATTTAGCAACGAGTATATAGTGATTACCATCTTGGTCGCCGCTGAAGGAGTACACAAATTGCCTGCTATAAACGGAAGCCTGGACTTGAAAGAAGCCTTACAGAAGCTTGCGTCTATCCCTTCGAGTAAAACCATGGTAAGAAACTCTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_190331.p1 GENE.R_Transcript_190331~~R_Transcript_190331.p1 ORF type:5prime_partial len:94 (-),score=19.28,DUF1517|PF07466.7|2.1e-29 R_Transcript_190331:300-581(-)
GIEDGEKKFNQLSIEERGKFDEETLVNVNNIKRQNTRSMRATGFSNEYIVITILVAAEGVHKLPAINGSLDLKEALQKLASIPSSKTMVRNST*

Click here to download the sequence:
Link to NCBI Protein BLAST