Transcript Information: R_Transcript_190414.p1


Annotated TAIR IDAT3G05410.2
Annotated Gene NamePhotosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1554783-1561456 | Forward length=280
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59359222616971
Replicate 21.3656130352064
Replicate 30.37246727798622
Condition 2: 8 Hour
Replicate 10.99536036370915
Replicate 20.18179578732671
Replicate 31.0330184905911
Condition 3: 24 Hour
Replicate 11.3065418747474
Replicate 21.6137994310179
Replicate 30.35589763718532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_190414.p1 GENE.R_Transcript_190414~~R_Transcript_190414.p1 ORF type:5prime_partial len:123 (-),score=10.32,PsbP|PF01789.12|7.2e-18 R_Transcript_190414:425-793(-)
CCCGGCGTTTCCCCGCGTTTCCCGTACCCGCACCGTTTCTGGTACGGGAGACGTGCCCTCCCAGGCGTTTCCGTGCAACGTAGGGTAGGGGACCTTCTGATTAGAACCATAACAGGCTCCAACCGCAGTCCAGAAGTGGAGGCTATGCTGTTAAGATCAAACATGAGAGAGGATTCACTAAGGAATGTTAATTATTATGAGTTGGAATTTAGGGTTGATAGCACCTCATTCCACCGCCACAATGTTGCTGTTTGTTGTGCTGAAAAGGGAAGGCTTTATACACTGAATGCCCAAGCTCCAGAATCAGAATGGCAACGGGTGAAAGAAGATTTCTATAAGATTGCTGCTTCTTTCAGTCTCACTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_190414.p1 GENE.R_Transcript_190414~~R_Transcript_190414.p1 ORF type:5prime_partial len:123 (-),score=10.32,PsbP|PF01789.12|7.2e-18 R_Transcript_190414:425-793(-)
PGVSPRFPYPHRFWYGRRALPGVSVQRRVGDLLIRTITGSNRSPEVEAMLLRSNMREDSLRNVNYYELEFRVDSTSFHRHNVAVCCAEKGRLYTLNAQAPESEWQRVKEDFYKIAASFSLTS*

Click here to download the sequence:
Link to NCBI Protein BLAST