Transcript Information: R_Transcript_190516.p1


Annotated TAIR IDAT2G31170.1
Annotated Gene NameCysteinyl-tRNA synthetase, class Ia family protein
Annotated Gene Symbol(s)SYCO ARATH
Annotation TypeOrtholog
Chromosome Positionchr2:13282559-13285616 | Reverse length=563
E-Value6E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24500618731166
Replicate 20.28182953578924
Replicate 30.46120948180173
Condition 2: 8 Hour
Replicate 10.16433466407547
Replicate 20
Replicate 30.60911445034856
Condition 3: 24 Hour
Replicate 10
Replicate 20.29604374349768
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_190516.p1 GENE.R_Transcript_190516~~R_Transcript_190516.p1 ORF type:3prime_partial len:149 (+),score=16.78,tRNA-synt_1e|PF01406.15|4.4e-20 R_Transcript_190516:108-551(+)
ATGTTCGTAATTTCACTGATGTTGATGACAAGAATAAGCATCAACATGCCTAAGCAAATCAGATTTGTACCATTCAGATCCCTGTGTACGCGTGTGTATTGTATATGCTGCAGAATAATTCGCAGAGCCAATGAGCACAAGGAAAAAGATCCAGATCATCCACTGAGTGATCCTTTGAATTTAAGTAATCATTTTTGCGATGAGTTTCTTAAAGACATGGATGATCGACAGTGCCCACGTCCCACCCACCAGCCACGTGTTTCTGAACACATGGATCAAATTAGGGATCTGATAGCTAAGATCATTGAAAATGGCTGTGCATACCCTCTTGATGGGGATGTTTACTTTTCTGTTGACAAGTTCCCAGATTATGGCAAGTTGTCCAAACGAAAGCTTGAGGACAACAGAGCTGGTGAACGGGTTTCTGTGGATTCTAGAAAGCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_190516.p1 GENE.R_Transcript_190516~~R_Transcript_190516.p1 ORF type:3prime_partial len:149 (+),score=16.78,tRNA-synt_1e|PF01406.15|4.4e-20 R_Transcript_190516:108-551(+)
MFVISLMLMTRISINMPKQIRFVPFRSLCTRVYCICCRIIRRANEHKEKDPDHPLSDPLNLSNHFCDEFLKDMDDRQCPRPTHQPRVSEHMDQIRDLIAKIIENGCAYPLDGDVYFSVDKFPDYGKLSKRKLEDNRAGERVSVDSRKR

Click here to download the sequence:
Link to NCBI Protein BLAST