Transcript Information: R_Transcript_190696.p1


Annotated TAIR IDAT3G01270.1
Annotated Gene NamePectate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:82892-84720 | Reverse length=475
E-Value7E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.099982382934753
Replicate 30.21815940567764
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.21005008467216
Replicate 30.2084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_190696.p1 GENE.R_Transcript_190696~~R_Transcript_190696.p1 ORF type:5prime_partial len:210 (-),score=31.31,Pec_lyase_C|PF00544.15|2.2e-07,Beta_helix|PF13229.2|4.9e-07 R_Transcript_190696:715-1344(-)
AAGAACAGGAAGAAGTTAGCAGATTGTGTCAAAGGATTTGGTCACTTTACAACTGGAGGCAAAGATGGTGAATACTACGTTGTAACTGATCCTTCTGATGATGATTTGGTGAATCCTAAGCCAGGAACCCTTCGTCATGCGGTGCTTCAACCCAGACCTCTGTGGATTATCTTCAAAAGAGACATGACAATTAGGTTGAAGGGTGAGTTGATAATAACCAGCGACAAGACGATCGATGGACGTGGTGCTCAAGTTCACATTGCAGATGGAGCTGGGATTACCATTCAATATGCTAAGAATATCATCATTCATAACATTAAGATCCATGACATTAAACCTCAATTTGGAGGGATGATTAGGGACACTTTTGACCACTTTGGTTTTAGGGGACGTGATGATGGTGATGGTATTAACATCTTTGCTTCCTCTAACATTTGGCTTGATCATCTTTCTATGTGGAATTGTCATGATGGCCTTATTGATGCCGTCAAGGGTTCCACTGCCATTACCATTTCAAACAACCACTTCACCCACCATGACCATGTAAGAACCAACATTCTATCTATCCATCTATCTATCAGTCGATCTTTCTGCATCGGTATGTCTAATGCTGAATTCGGATTGGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_190696.p1 GENE.R_Transcript_190696~~R_Transcript_190696.p1 ORF type:5prime_partial len:210 (-),score=31.31,Pec_lyase_C|PF00544.15|2.2e-07,Beta_helix|PF13229.2|4.9e-07 R_Transcript_190696:715-1344(-)
KNRKKLADCVKGFGHFTTGGKDGEYYVVTDPSDDDLVNPKPGTLRHAVLQPRPLWIIFKRDMTIRLKGELIITSDKTIDGRGAQVHIADGAGITIQYAKNIIIHNIKIHDIKPQFGGMIRDTFDHFGFRGRDDGDGINIFASSNIWLDHLSMWNCHDGLIDAVKGSTAITISNNHFTHHDHVRTNILSIHLSISRSFCIGMSNAEFGLV*

Click here to download the sequence:
Link to NCBI Protein BLAST