Transcript Information: R_Transcript_190772.p1


Annotated TAIR IDAT5G18110.1
Annotated Gene Namenovel cap-binding protein
Annotated Gene Symbol(s)NCBP
Annotation TypeOrtholog
Chromosome Positionchr5:5989105-5990588 | Reverse length=221
E-Value1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 186.189990517125
Replicate 264.02459319768
Replicate 379.403175613569
Condition 2: 8 Hour
Replicate 172.908584416909
Replicate 288.139978199113
Replicate 3100.9327227322
Condition 3: 24 Hour
Replicate 192.345977951796
Replicate 286.045180425122
Replicate 393.341736131118


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_190772.p1 GENE.R_Transcript_190772~~R_Transcript_190772.p1 ORF type:complete len:223 (+),score=55.90,IF4E|PF01652.14|8.5e-50 R_Transcript_190772:153-821(+)
ATGGACATGGTGGAGAAGAAAGAAGCTTCTGATAACAACAAACAAGGAGTATTAGTTGATCAATCTCTCTCTGAGAAAGATGTTGAAGATCGTGAACGTCAGGCTCGTGACCTCAAAGCCGGCCTTCATCCTCTTAGGCACAAGTTTGTGTTTTGGTACACTCGTCGGACTCCTGGTGTGCGAACTCAAACACCATATGAAGAGAGCATAAAGAAAATTGTGGACTTCAGCACGGTTGAAGGATTTTGGATCAGCTACTGTCATTTTGCTCGCCCTTCTTCTTTGCCGAGTCCCACTGATTTGCATCTTTTCAAGGAAGGAATCCGGCCATTGTGGGAGGATTCAGCTAATTGCAATGGAGGGAAGTGGATTATTCGATTCAAGAAGGCTGTTTCAGGGCGCTTCTGGGAAGATTTGGTTCTAGCCTTGGTTGGTGACCAGCTTGACTATGGGGATAATATATGTGGTGCAGTTCTCAGTGTTCGATTCAGCGAGGATATATTGAGTGTCTGGAACAAGAATGCATCTGACCGTCAGGCTGTAATGGCTTTACGAGATGCGATCAAGCGACACTTGAAGCTTCCCCATGGTTATGTGATGGAATACAAGCCACACGATGCTTCTCTACGTGACAACTCTTCATACAGAAACACATGGTTGAGGGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_190772.p1 GENE.R_Transcript_190772~~R_Transcript_190772.p1 ORF type:complete len:223 (+),score=55.90,IF4E|PF01652.14|8.5e-50 R_Transcript_190772:153-821(+)
MDMVEKKEASDNNKQGVLVDQSLSEKDVEDRERQARDLKAGLHPLRHKFVFWYTRRTPGVRTQTPYEESIKKIVDFSTVEGFWISYCHFARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGDNICGAVLSVRFSEDILSVWNKNASDRQAVMALRDAIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG*

Click here to download the sequence:
Link to NCBI Protein BLAST