Transcript Information: R_Transcript_19117.p1


Annotated TAIR IDAT5G20200.1
Annotated Gene Namenucleoporin-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6816776-6821620 | Forward length=762
E-Value4.6E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3394949580609
Replicate 24.9257375812809
Replicate 37.0551550918687
Condition 2: 8 Hour
Replicate 15.5839325043521
Replicate 26.7405017345645
Replicate 36.9228292143285
Condition 3: 24 Hour
Replicate 17.1912397476032
Replicate 26.792904114398
Replicate 37.6305759458908


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19117.p1 GENE.R_Transcript_19117~~R_Transcript_19117.p1 ORF type:complete len:763 (+),score=133.60 R_Transcript_19117:105-2393(+)
ATGCGAGAGGCCAATGAACAACCGTCATCGTCAGCGGGACTCTACGGCGTCGGAGAGTCCAGAGGCGCCGGAGGAAAATTACGGCGAGAGAGGAATAGACCTCCGTCAACACCTTACGACCGTCCACCACAACCTCAACCTCCTGCAAACAACCGCGGGTGGATTTCGAAAATCGTTACTCCCGCTAAACGCCTCATCTCCGGTAGCGCCACTCGTCTTCTCCCCTCTCTCTTCGCTCCTCCTCCTCTTCCCGAACCTCCCTCTCCCGCCGATGAAAGGCCAACAGAGGTAGAGCAAGAGACTCCAGATCACAATGCAAGTTGTTCTTTGGCTGTAAGGCTTCTTGTTGCTCCCAAATCGAGCAGTGACTTAGGCCCCAGTGAAGCCGAAGGACAAGCAAAACTTCACAATTCTGATAAAGATAAACATGTGAATTTAAGAGACCCTTCTGATGATCAACTTCCTGACATTGAGCAGCTTATCAAAATGAAGACATTTTCTAGAGGAGAGATTGATCGTTTGATGGAGGTATTGCATTCAAGAGTTATTGATGAAGAGCAAGAAAGACAAATTTGTGCTGTGTCTGGACCGGGCAAAGCTGAAAAGCCAGAATCATCCCATGGAAAACAAAATACAGCAATAGATAAGGAACAACTAGACAAATTTGAATGGACTGCTACTCCTCCCCCGCGCTCAACTGTGCTTGCTGAAATTGGTGCTTCGCCAGTTGATATCGCTAGGGCATATATGGGTTCAAGAACATCAGAGGTGGGATTTACATCCATGAGTCTGACTTCAAGAAGTGAGAAATTTCCACTTCCTAATGAGCTTCCCTCAAAGACATTTATGCCATCACCTTTGCCAAAAGCTCCAGTATGCTGGCCTGGTGCCATCACACAGGATCAGCAGGGGTTTTCAACACCCCAAAGTCAAAAAGGCAGATATGGGTTTCAAAGTTTTCCTCGAACCCCTTATTCAAGGACACTGTATACAAAGTCCAAGTCCAAGGTAACTCCGCTTCGGGGTGACAGCTTTTTACCTTTCCAGCCAATGAGAACTCCTGTGTATGAAAAGTCAACATATAATGTAGCTGAAGGTAGGTATGCATCTGGAGGACCCATTCGTAGGATGCGAAATAAATATAGTTCAACTACACCAGCAAGGGATTCGACTCTTTCGCAGTCTGTACAGAGAAGTCCTTGGACAAAAGACTCCAATGCTGGCCCTATGGTTAAGAAAAATTTTGAGCCCGACATTTCTAGTACCCATATGGAACCAATACTAAGCAAGCAACAGAACTCTGAAGTAGGTGTTCCTAGTGCTCATCCGCACAGCAGTAAGCTTGCAAGGCAGATATTGGAGCAAATTGACAGACCAATAACTCTTAAAGAAAAATCAGAGGAGTTGATGCTAGTTGCTTCATGGAAGAACTCATCCAAAGCTGCTTTGGCTGCACCCATCCAAAACAGCAGTTCTCCTTCTACTTCCGGAGCAGGTGCCAGCAAAGAAATGTTTGTTGATGCTGCAAAACTTGCTGGTCAAACTAATGGAGGGAACAATGCTCTTCCTCTAGATCAAAGTAATGTCATAAGTGGTTCTGGAAAAGGCGTGGCATCTGCTTTTCCGATATCCCTTGATAAAACAAGCAATATTTCTGGTATGAGTTTTGGGCCACAATCAAGTGTCCAAAAGTTCGATTCGCATATGAAGAGTACATATGAGGCAAACAATGACAATCTAACAAAGAAGAATGGTCAGTCCTGGCTCACTGGCGACCAAAGTAAAGCGGTACACATTACAAACAATTCATCTGGATCTGAGCCACAGAACGTGCAAAGAAGGCCGGTTTTGCCATCAATTTCAGTTGACAAGTCTGGTATAAGGAACGCATTTACTTCAGATACTAGTACTGGGTTCTCTTTCCCGGTTACGAGATCATCTAGCACATCAATGGAGCCACCTACACCATCTATCATGCCTTCTACCTCAATGATTCCTGCAGAACAACCAAAAGTTCCTGCCCAGTCCTCTACGTTTACCTTCGGCAGCAAGATAACCATTGCGCCACCTGTTGTTCCAATTCCTCCTCCAAGCACGGTCTCTACTCTGAACGGTGCTTCGGCTCCCAAGTTCAAATTTGGGTCTGGACAGACTAGGTTATCCTTTGCATTAGCTGGGAACGATGCTGCTTCTGCCCCTAACGATGCTGTGATGCCCAAATACAAGTTTGGGTCGGGGAAAAGTAGGTTGAACTTTGGATCAGTAGGGAGCGATGCTGTCCGCTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19117.p1 GENE.R_Transcript_19117~~R_Transcript_19117.p1 ORF type:complete len:763 (+),score=133.60 R_Transcript_19117:105-2393(+)
MREANEQPSSSAGLYGVGESRGAGGKLRRERNRPPSTPYDRPPQPQPPANNRGWISKIVTPAKRLISGSATRLLPSLFAPPPLPEPPSPADERPTEVEQETPDHNASCSLAVRLLVAPKSSSDLGPSEAEGQAKLHNSDKDKHVNLRDPSDDQLPDIEQLIKMKTFSRGEIDRLMEVLHSRVIDEEQERQICAVSGPGKAEKPESSHGKQNTAIDKEQLDKFEWTATPPPRSTVLAEIGASPVDIARAYMGSRTSEVGFTSMSLTSRSEKFPLPNELPSKTFMPSPLPKAPVCWPGAITQDQQGFSTPQSQKGRYGFQSFPRTPYSRTLYTKSKSKVTPLRGDSFLPFQPMRTPVYEKSTYNVAEGRYASGGPIRRMRNKYSSTTPARDSTLSQSVQRSPWTKDSNAGPMVKKNFEPDISSTHMEPILSKQQNSEVGVPSAHPHSSKLARQILEQIDRPITLKEKSEELMLVASWKNSSKAALAAPIQNSSSPSTSGAGASKEMFVDAAKLAGQTNGGNNALPLDQSNVISGSGKGVASAFPISLDKTSNISGMSFGPQSSVQKFDSHMKSTYEANNDNLTKKNGQSWLTGDQSKAVHITNNSSGSEPQNVQRRPVLPSISVDKSGIRNAFTSDTSTGFSFPVTRSSSTSMEPPTPSIMPSTSMIPAEQPKVPAQSSTFTFGSKITIAPPVVPIPPPSTVSTLNGASAPKFKFGSGQTRLSFALAGNDAASAPNDAVMPKYKFGSGKSRLNFGSVGSDAVRC*

Click here to download the sequence:
Link to NCBI Protein BLAST