Transcript Information: R_Transcript_19118.p1


Annotated TAIR IDAT5G20200.1
Annotated Gene Namenucleoporin-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6816776-6821620 | Forward length=762
E-Value5E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.794552262003
Replicate 26.0183948015589
Replicate 35.8826641297512
Condition 2: 8 Hour
Replicate 16.0658887223396
Replicate 26.8445760240205
Replicate 36.8274540595489
Condition 3: 24 Hour
Replicate 17.7419323984476
Replicate 26.2075112571404
Replicate 37.579788782622


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19118.p1 GENE.R_Transcript_19118~~R_Transcript_19118.p1 ORF type:complete len:771 (+),score=135.63 R_Transcript_19118:105-2417(+)
ATGCGAGAGGCCAATGAACAACCGTCATCGTCAGCGGGACTCTACGGCGTCGGAGAGTCCAGAGGCGCCGGAGGAAAATTACGGCGAGAGAGGAATAGACCTCCGTCAACCCCTTACGACCGTCCACCACAACCACAACCACAACCGCCTGCAAACAACCGCGGGTGGATTTCGAAAATCGTTACTCCCGCTAAACGCCTCATCTCCGGTAGCGCCACTCGTCTTCTCCCCTCTCTCTTCGCTCCTCCTCCTCTTCCCGAACCTCCCTCTCCCGCCGATGAAAGGCCAACAGAGGTAGAGCAAGAGACTCCAGATTGCAACGCAAGTTGTTCTGTGGATGCAAGGCTTCTTGTTGCTCCCAAATCGAGCAGTGACTTAGGCCCCAGTGAAGCCGAAGGACAAGCAAAACTTCACAATTCTGATAAAGATAAACATGTGAATTTAAGAGACCCTTCTGATGATCAACTTCCTGACATTGAGCAGCTTATCAAAATGAAGACATTTTCTAGAGGAGAGATTGATCGTTTGATGGAGGTATTGCATTCAAGATTTATTGATGAAGAGCTAGAAAGACAACATTGTGCTGTGTCTGGGCCGGGCAAAGCTGAAAAGCCGGAATCATCCCATGGAAAGCAAAATACAGCAATAGATAAGGAACAACTAGACAAATTTGAATGGACTGCTACTCCTCCCCCGCGCTCAACTGTGCTTGCTGAAATTGGTGCTTCGCCAGTTGATATCGCTAGGGCATATATGGGTTCAAGAACATCAGAGGTGGGATTTACATCCATGAGTCTGACTTCAAGAAGTGAGAAATTTCCACTTCCTAATGAGCTTCCCTCAAAGACATTTATGCCATCACCTTTGCCAAAAGCTCCAGTATGCTGGCCTGGTGCCATCACACAGGATCAGCAGGGGTTTTCAACACCCCAAAGTCAAAAAGGCAGATATGGGTTTCAAAGTTTTCCTCGAACCCCGTATTCAAGGACACTGTATGCAAAATCTAAGTCCAAGGTAACTCCACTTCAGGGTGACAGCGAGAAAATGCTGAACATTTCACCTGTCCAGGCAATGAGAACTCCTGTGTATGGAAAGTCAATGAATAATGTGGCTGAAGGTAGTCATGCATCTGGAGGACCCATTCGTAGGATGCGAAATAAATATAGTTCAACTACACCAGCAAGGGATTCGACTCTTTCGCAGTCTGTACAGAGAAGTCCTTGGACAAAAGACTCCAATGCTGGCCCTATGGTTAAGAAAAATTTTGAGCCCGACATTTCTAGTACCCATATGGAACCAATACTAAGCAAGCAACAGAACTCTGAAGTAGGTGTTCCTAGTGCTCATCCGCACAGCAGTAAGCTTGCAAGGCAGATATTGGAGCAAATTGACAGACCAATAACTCTTAAAGAAAAATCAGAGGAGTTGATGCTAGTTGCTTCATGGAAGAACTCATCCAAAGCTGCTTTGGCTGCACCCATCCAAAACAGCAGTTCTCCTTCTACTTCCGGAGCAGGTGCCAGCAAAGAAATGTTTGTTGATGCTGCAAAACTTGTTGGTCAAACTAATAGAGAGAACAATGCTCTTTCTCTAGATAAAAGTAATGTCACAAGTGGTTCTGGAAAAGGTGTGGCATCTGCTTTTCCAATATCCCTTGATAAAGCTAGTAATATTTCTGGTATGAATTTCGGGCCACAATCATCAAGTGTCCAAAAGTTCGATTCGCATATGAAGAGTACTGATGAGGCAAACAATGACAATCTGACAAAGAAGAATGGTCAGTCTTGGCTCACTGGCGACCAAAGTAAAGCGGTACACATTACAAACAATTCATCTGGATCTGAGCCACAGAACGTGCAAAGAAGGCCGGTTTTGCCATCAATTTCAGTTGACAAGTCTGGTATAAGGACCTCATTTGCTTCAGATACTAGTACTGGGTTCTCTTTCCCGGTTACGAGATCATCTAGCACATCAATGGAGCCACCTACACCATCTATCATGCCTTCTACCTCAATGATTCCTACACAACAACCAGAAGTTCCTGCCCAGTCCTCTACATTTACCTTCGGCAGCAAGATAACCATTGCGCCGCCTGTTGTTCCGATTTCTCCTCCAAGCACGGGCTCTACTCCAAACGATGCTTCGGCGCCCAAGTTCAAATTTGGTTCTGGACAGACCAGGTTATCTTTTGCATTAACTGGGAACGATGCTGCCTCTGCCCCTAACGATGCTGTGATCCCCAAATACAAGTTTGGGTCGGGGAAAAGTAGGTTGAACTTTGGATCAGTAGCGAGCGATGCTGTCCACTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19118.p1 GENE.R_Transcript_19118~~R_Transcript_19118.p1 ORF type:complete len:771 (+),score=135.63 R_Transcript_19118:105-2417(+)
MREANEQPSSSAGLYGVGESRGAGGKLRRERNRPPSTPYDRPPQPQPQPPANNRGWISKIVTPAKRLISGSATRLLPSLFAPPPLPEPPSPADERPTEVEQETPDCNASCSVDARLLVAPKSSSDLGPSEAEGQAKLHNSDKDKHVNLRDPSDDQLPDIEQLIKMKTFSRGEIDRLMEVLHSRFIDEELERQHCAVSGPGKAEKPESSHGKQNTAIDKEQLDKFEWTATPPPRSTVLAEIGASPVDIARAYMGSRTSEVGFTSMSLTSRSEKFPLPNELPSKTFMPSPLPKAPVCWPGAITQDQQGFSTPQSQKGRYGFQSFPRTPYSRTLYAKSKSKVTPLQGDSEKMLNISPVQAMRTPVYGKSMNNVAEGSHASGGPIRRMRNKYSSTTPARDSTLSQSVQRSPWTKDSNAGPMVKKNFEPDISSTHMEPILSKQQNSEVGVPSAHPHSSKLARQILEQIDRPITLKEKSEELMLVASWKNSSKAALAAPIQNSSSPSTSGAGASKEMFVDAAKLVGQTNRENNALSLDKSNVTSGSGKGVASAFPISLDKASNISGMNFGPQSSSVQKFDSHMKSTDEANNDNLTKKNGQSWLTGDQSKAVHITNNSSGSEPQNVQRRPVLPSISVDKSGIRTSFASDTSTGFSFPVTRSSSTSMEPPTPSIMPSTSMIPTQQPEVPAQSSTFTFGSKITIAPPVVPISPPSTGSTPNDASAPKFKFGSGQTRLSFALTGNDAASAPNDAVIPKYKFGSGKSRLNFGSVASDAVHC*

Click here to download the sequence:
Link to NCBI Protein BLAST