Transcript Information: R_Transcript_191216.p1


Annotated TAIR IDAT1G52770.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19656009-19657546 | Forward length=454
E-Value4.9E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68363149643141
Replicate 20.47182697564715
Replicate 30
Condition 2: 8 Hour
Replicate 11.1921956715887
Replicate 20.25124586338411
Replicate 30.20395068112794
Condition 3: 24 Hour
Replicate 10.60189007713082
Replicate 20.49562379529387
Replicate 30.73778779843474


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_191216.p1 GENE.R_Transcript_191216~~R_Transcript_191216.p1 ORF type:complete len:267 (+),score=62.59,NPH3|PF03000.10|1.7e-65 R_Transcript_191216:519-1319(+)
ATGAAGAGGGTCACCTTGTCTGAGCCCCCTGTTGCGCCTGCTAGCGCAGGCAAACCACCACAAGCCCCCAAGTATTGTCTTGACGATGCCTGCATCCTCGACATGGACTACTTTGTGAAGACTCTCTCCGGCATCAAGGCCAAGGGGGTCCGGCCCGACTTGGTGGGCTCCATCATAGCTCACTACGCCTCCAAGTGGGTCCCAGAGCTGTCAGAGAGTAGGGATGTTGCCATGGAATTCGAGGGGGATTCAACAACATCCCCAGAGAGTGTGACTGCCAAGTGGAGGAAGAAGCGGTTCTTTGTTGAAACCCTAGTAGGAATCCTCCCCCCGGAGAATGATGCTGTCCCATGCAACTTCTTACTAAGGCTCCTAAGGGTTGCCAACATGTTAGGCATAGACTCTACTTATAAGGAGGAGCTAGAAAGGAGGGTGTCATGGCAGTTAGATCAAGCCTCATTGAAGGAGCTCATGATACCTGCTTTTAGCCACACTTGTGCTACATTGCTTGATTTTGAGCTCGTCAGGAGGTTAGTTGAAAGGTTTGTAGGATTAGATGAAGGTGTTAGAAGTGGGGCCGCCTTGATTAAGGTGGCCAAATTGGTGGATTGTTACTTGGCTGAGGCAGCTGTTGATTCCAACTTAAGCTTAGAGGACTTCATGGAGCTTGCTAATGCTTTGCCTTCTCATGCTAGGGCCACAGATGATGGACTTTACCGTGCAATTGATACTTATCTCAAGGTAATGCAATATGCCTCATGTGAATCATGTACTCCCTCCGTCCCAAAATCAAGTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_191216.p1 GENE.R_Transcript_191216~~R_Transcript_191216.p1 ORF type:complete len:267 (+),score=62.59,NPH3|PF03000.10|1.7e-65 R_Transcript_191216:519-1319(+)
MKRVTLSEPPVAPASAGKPPQAPKYCLDDACILDMDYFVKTLSGIKAKGVRPDLVGSIIAHYASKWVPELSESRDVAMEFEGDSTTSPESVTAKWRKKRFFVETLVGILPPENDAVPCNFLLRLLRVANMLGIDSTYKEELERRVSWQLDQASLKELMIPAFSHTCATLLDFELVRRLVERFVGLDEGVRSGAALIKVAKLVDCYLAEAAVDSNLSLEDFMELANALPSHARATDDGLYRAIDTYLKVMQYASCESCTPSVPKSSF*

Click here to download the sequence:
Link to NCBI Protein BLAST