Transcript Information: R_Transcript_191334.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.942302255438
Replicate 20.94214168534671
Replicate 31.468380615138
Condition 2: 8 Hour
Replicate 11.3498617855533
Replicate 22.1214169951894
Replicate 32.7460128887252
Condition 3: 24 Hour
Replicate 10.8241264133022
Replicate 20.76345126928921
Replicate 31.0382629146349


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_191334.p1 GENE.R_Transcript_191334~~R_Transcript_191334.p1 ORF type:5prime_partial len:780 (+),score=121.68,RVT_1|PF00078.23|4.9e-26,RVT_1|PF00078.23|24,zf-RVT|PF13966.2|2.2e-15,zf-RVT|PF13966.2|3.9e+03,RVT_3|PF13456.2|2.2e-14 R_Transcript_191334:2-2341(+)
GCTTTTGATAGTTTGGAGTGGGACTTTATTAGGGAAACTCTCTTCGGTTTTGGTTTTCCACCTAAACTCATTAAATTGGTGATGTCTTGTGTTACCTCGGCTAAAATTTCTATTCTCTGGAATGGGGAGATTTTGGAGCCTTTTTTGCCTTCGAGAGGAATTCGACAGGGGGATCCCCTGTCGCCCTACATTTTTGTGCTCTGCATGGATCGTTTATCTCAAATGATTGAGGCACAGGTGTCTAGGGGCACTTTTATTCCTGTGACTATTGACCAGCAGATTAAAGTTTCTCACATCTTCTATGCTGATGATGTCCTCCTATTTGGTAGGGCTACCCGCTCCAATGTGGAGGCAATGATTGGGGTTTTGGATAGCTTTGGTGAGCTCTCAGGTCTCTTGATTAACAAATCCAAATCCAAGATCATTTTCCCTCCATCGATGCCTCACAGGATTCGACGTCTTATAGCTGAGACTTCTAGTATTCCGGGGAGCACTTCTTTTGGCAATTATCTTGGTATTCCTCTATCTACTAGTAAACTCAAGGTGAATGAGTTCCATTTCCTCCTGGATAAAGTTAAAACCAGACTTCAAGGGTGGCAAGGGCATTTCCTCAATCTGGCTGGGAAATGCACTTTGATCAAATCTGTTCTGAGTTCTCTCCCAGCTTACACGATGCAAGTCACCAAACTCCCAACAACCATTGTCGAACATCTAGAGAAAACCTTGCGTCGCTTCCTTTGGAGCAAGTCCAATTCATCCCGTTTCTTGGCGAGGGTCAATTGGGAGGAAGTTTGTAAACCATTAGCATCGGGGGGCTTGGGGATCAGGAAGCTTAGTGTTTGGAATTTGGCTTTCCTTGCTAAGCTCGCTTGGAGGTTTTTGGTAGAGGATAATAGACTCTGGGTGCGTGTTCTTAAAGCAAGATATTTGAAGAATCAGTCTTTTCTTAGTGCTTTAGGCCCTTGCAATTCTTCGCACATATGGAAGGCTATTCTGGAAGGAAAAGAGAAGCTCCTTGAGGGACTTAAAGTGCGAATTGGAAATGGGCTTGATACCTCTCTTTGGTATGATTGGTGGGTTGGAGGTAAACCTCTTGTGCACTACCTGCCCTCGGATGTCCCCCTGTACTTAGCTAATTGGCGTGTTGCTGATATATTGGTCAATATTGGGTCTTGGGACTTATCTAGAATTTCCTATCTCCTTCCTAAAGATATTCTGCTTGACATCCAAAGTACCCCACTTTCTCTTAACGATTCCTGCAATGACTCTCTGAGGTGGGGACTTTCTGAAAAGGGCATTGTTTCGGTTAAGTCTGTTTATAACCATCTTGCTTCTTCTTCTTTCCGGAGCTCGACATCCTTTTCATGGAAAAAAATTTGGAAGCTTCCTATTCCAATGAAAATGCATATGATGGCTTGGTGTCTCCTGCATAATATTCTACCTACTGCCGCTTTTCTTAGTGCTCGTTTGCCAAATTTCAATCCTCACTGTCTTTCCTGCTATGCAACCATTGAGGACTCCCTTCATATCTTTCGAGATTGCCCCCATGCTTCTGCAATCTGGTCCCTTCTCTTTCAAGGGGATGTTTCCCTTGACTTTTTAAAATTTTTCAATTCTGCATGGTGGGAGTGGTTGGTTTATAATTTGAACATTGATAAGATTTGGAGTTCCAAATTTTTCAATATTCTCTGGCATGTTTGGTGCACAAGAAACAAAAGAATTTTTCAAAATACAGACACTAATCTGCGGTGGGTTATGTGTTGTATTCTCAATGATCTTACTATATTGAACTCTACTCAATATTTTGGCAAGCCAATTGCTAATTTGCAGGAACTTGTCATTTCCTGGAAGCCCCCCAGAGAGGACGTCTTCAAGCTTAATGTGGATGGCTCTGTCAAAAAGAATCCTCCGGGTACTGCTGGAGGAGGGGTGATCCGTGACTTTACAGGACAGTGGATTTATGGCTTTGCTGTTCGCTTTGAGCTCTCTTCCCCAATGGCTGCGGAGGTCTTGAGCTTGCGGGAAGGTCTTCGAATTGCATGGGATAGAAACATTAAAAAATTTGAAGTTGAACTGGATGCTTTGGGAGTGGTTGAGTTGCTGAAGACCCTTGAGATCGCCCTCAGACATGAGCTAGGATCAATTTTTGATGATATCATAGGATACATGAGAAAGGATTGGGAACTAACTCTTCTGCACACTCGAAGGGAAGCCAATACTGTAGCCCATGCAATGGCTGTGCTTGCTTATGAATTGAAAGAACTGAGGCTGGGCTTTCTGGAACCATCTGATTCTGTGAAGGTCTTCTATGACACGGATTTACAAGGCCTCAGAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_191334.p1 GENE.R_Transcript_191334~~R_Transcript_191334.p1 ORF type:5prime_partial len:780 (+),score=121.68,RVT_1|PF00078.23|4.9e-26,RVT_1|PF00078.23|24,zf-RVT|PF13966.2|2.2e-15,zf-RVT|PF13966.2|3.9e+03,RVT_3|PF13456.2|2.2e-14 R_Transcript_191334:2-2341(+)
AFDSLEWDFIRETLFGFGFPPKLIKLVMSCVTSAKISILWNGEILEPFLPSRGIRQGDPLSPYIFVLCMDRLSQMIEAQVSRGTFIPVTIDQQIKVSHIFYADDVLLFGRATRSNVEAMIGVLDSFGELSGLLINKSKSKIIFPPSMPHRIRRLIAETSSIPGSTSFGNYLGIPLSTSKLKVNEFHFLLDKVKTRLQGWQGHFLNLAGKCTLIKSVLSSLPAYTMQVTKLPTTIVEHLEKTLRRFLWSKSNSSRFLARVNWEEVCKPLASGGLGIRKLSVWNLAFLAKLAWRFLVEDNRLWVRVLKARYLKNQSFLSALGPCNSSHIWKAILEGKEKLLEGLKVRIGNGLDTSLWYDWWVGGKPLVHYLPSDVPLYLANWRVADILVNIGSWDLSRISYLLPKDILLDIQSTPLSLNDSCNDSLRWGLSEKGIVSVKSVYNHLASSSFRSSTSFSWKKIWKLPIPMKMHMMAWCLLHNILPTAAFLSARLPNFNPHCLSCYATIEDSLHIFRDCPHASAIWSLLFQGDVSLDFLKFFNSAWWEWLVYNLNIDKIWSSKFFNILWHVWCTRNKRIFQNTDTNLRWVMCCILNDLTILNSTQYFGKPIANLQELVISWKPPREDVFKLNVDGSVKKNPPGTAGGGVIRDFTGQWIYGFAVRFELSSPMAAEVLSLREGLRIAWDRNIKKFEVELDALGVVELLKTLEIALRHELGSIFDDIIGYMRKDWELTLLHTRREANTVAHAMAVLAYELKELRLGFLEPSDSVKVFYDTDLQGLRK*

Click here to download the sequence:
Link to NCBI Protein BLAST