Transcript Information: R_Transcript_191820.p1


Annotated TAIR IDAT5G52420.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21281817-21282545 | Forward length=242
E-Value1.4E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.790259873526
Replicate 211.914567299725
Replicate 311.180669540979
Condition 2: 8 Hour
Replicate 17.5789581979569
Replicate 26.7437580155956
Replicate 38.4275335023225
Condition 3: 24 Hour
Replicate 110.021265059712
Replicate 210.414983364995
Replicate 311.812412053246


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_191820.p1 GENE.R_Transcript_191820~~R_Transcript_191820.p1 ORF type:complete len:252 (+),score=46.65 R_Transcript_191820:173-928(+)
ATGTCAGGTGGTGTAGGTCCAACAGGTGACATAAGTCTCCCAAAAGAAGAAGTAGCACCATCATCTTCCCAAGATGAAGGCCAAGCCTTCCAAAATCAAAGTTTAAAACACCCCAAAAAGTCAGGCAAAGGTTTCTTATCATTTCGCCAGTTAAACTCTTTATCCATAATGATTGTCTTAGCTGCTAGTGGTATGGTTAGCCTTGAGGACTTTGCTTTGGTAGTTTTTTCCTTGATATACTTTTACTTTCTCTCTATTGTTGCTTTTCTTACACACTCTCCTAGCCAAGAACAACCTGTTTTTAACCAAAAATCCAAGATCCTCAACCTCTATGTACTTTTTGCTGGGATTATAGGCTTGTTGCTCCCCATTCTCTATATATTAGAAGGCATATTAGAGGGTGATAAAGAGGGGATCAAGGCAGCTGTTCCTCATGTTTTTCTCCTTGCAAGCCAGGTTTTTATGGAAGGTGTTTCTGTTTCGGACCGGTTTTCCTTGCCTATAAGGGTGTTTGTGCCGGTTTTCTATAACTCGAGCCGGCTTTTTACGCTTTTCGATTGGTTCAAAGATGAGATGCTTAAGGTTGGGGAAGGTAGATATGCTGGTTCTGCTAGGAGGTTGTTTGTTGGGAGAGCTCTTGCTGTTGTTAATTTGGGTTTTTGGTGTTTTAATTTGTTTGGTTTCTTGTTGCCTGTGTACCTCCCGGCTTTTAAGAGATATTATGGTGTTGAGGGTTCTACTAGTAAGAAAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_191820.p1 GENE.R_Transcript_191820~~R_Transcript_191820.p1 ORF type:complete len:252 (+),score=46.65 R_Transcript_191820:173-928(+)
MSGGVGPTGDISLPKEEVAPSSSQDEGQAFQNQSLKHPKKSGKGFLSFRQLNSLSIMIVLAASGMVSLEDFALVVFSLIYFYFLSIVAFLTHSPSQEQPVFNQKSKILNLYVLFAGIIGLLLPILYILEGILEGDKEGIKAAVPHVFLLASQVFMEGVSVSDRFSLPIRVFVPVFYNSSRLFTLFDWFKDEMLKVGEGRYAGSARRLFVGRALAVVNLGFWCFNLFGFLLPVYLPAFKRYYGVEGSTSKKE*

Click here to download the sequence:
Link to NCBI Protein BLAST