Transcript Information: R_Transcript_191960.p1


Annotated TAIR IDAT5G04870.1
Annotated Gene Namecalcium dependent protein kinase 1
Annotated Gene Symbol(s)CPK1, ATCPK1
Annotation TypeOrtholog
Chromosome Positionchr5:1417015-1419877 | Reverse length=610
E-Value1.7E-288
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7148391293411
Replicate 21.5282117391609
Replicate 31.6672625465554
Condition 2: 8 Hour
Replicate 10.30994765756007
Replicate 20.21228685292265
Replicate 30.22976722304287
Condition 3: 24 Hour
Replicate 11.2713975521672
Replicate 21.1167219691432
Replicate 30.90044354724578


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_191960.p1 GENE.R_Transcript_191960~~R_Transcript_191960.p1 ORF type:complete len:632 (+),score=135.79,Pkinase|PF00069.21|3.5e-73,EF-hand_1|PF00036.28|6.3e+03,EF-hand_1|PF00036.28|3e-09,EF-hand_1|PF00036.28|0.0003,EF-hand_1|PF00036.28|6.4e-06,EF-hand_1|PF00036.28|2.7e-07,EF-hand_7|PF13499.2|3.5e-12,EF-hand_7|PF13499.2|4.9e-12,EF-hand_6|PF13405.2|8.2e-07,EF-hand_6|PF13405.2|0.11,EF-hand_6|PF13405.2|4.9e-07,EF-hand_6|PF13405.2|0.004,Pkinase_Tyr|PF07714.13|2.1e-24,EF-hand_8|PF13833.2|0.00068,EF-hand_8|PF13833.2|7.3e-11,EF-hand_8|PF13833.2|0.91,EF-hand_8|PF13833.2|4.2e-09,EF-hand_5|PF13202.2|2.9e-06,EF-hand_5|PF13202.2|0.64,EF-hand_5|PF13202.2|0.00055,EF-hand_5|PF13202.2|0.0025,EF-hand_4|PF12763.3|75,EF-hand_4|PF12763.3|0.0012,EF-hand_4|PF12763.3|0.03,EF-hand_9|PF14658.2|0.0021,EF-hand_9|PF14658.2|10 R_Transcript_191960:726-2621(+)
ATGGGAAACAATTGCTTATCAAGTCTAGCGAAGGGCGCGTTTTGGTGCAAGCCACCAAAACAGATGATTGCTGAGAGTCAAAAAGGTGATGGAAAAGAAAAATCGTCAGTTGACAAGAATACTGATGGTCTTTCAGATGTTCAAATCAAACCTCCTGAGGTAGTGAAGGTTGGGAGTAAATTAGGAAGACAAGAAAGCCGACTAGGAAGACAAGAAAGTCGACTAGGAAGACAAGAGAGCCGACTAGGGAGACAAGAAAGTCGGTTAGGGAGACAAGAGAGCAGGATGGGAAGACAAGAGAGCAGATTAACGCGACAAGAGAGCAAAGTACTGCAGCCTAATGTAGGAGGAGATGCTAAGAATAAACCGAATGTGAATGTGAAGAGGGTAGCAAGTGCGGGGTTGCAAGTACAATCAGTTTTGAGAAGAAAGACTGGCAACTTGAAGGATCATTACACCTTGGGGAAGAAACTCGGTCATGGTCAATTTGGGACGACTTTTCTCTGTGTGGAGAAATCCAGTGGGAAAGAATATGCTTGCAAGTCTATCGCCAAGAGGAAGTTGGTCAATAGAGAAGATGTCGAAGATGTGAGAAGGGAAATCGAGATTATGCATCACTTGAAAGGGCATCCTAATGTTATCACTATCAAGGATGCTTATGAAGATGCTGTGGCTGTTCATGTTGTCATGGAATTGTGTATTGGTGGTGAGCTTTTCGATAGAATTGTTAAGAGGGGGCATTATACTGAGAGGAAGGCGGCTGATCTTGCCAGGACTATCGTTGGTGTTGTGGAAGCTTGTCACTCGTTAGGAGTCATGCACCGTGATCTTAAGCCTGAAAACTTCCTGTTTGTCAATGAGGATGAGGATTCACATCTCAAGACTATTGACTTTGGTTTGTCGATATTCTTCAAGCCAGGGGATATTTTCCATGATGTCGTTGGAAGTCCATATTACGTAGCACCTGAGGTATTGCGTAAGCGCTATGGTCCTGAGGCTGATGTTTGGAGTGCAGGAGTTATCCTTTACATCCTCCTTAGTGGAGTACCTCCATTTTGGGCTGAAACGGAGGAAGAAATATTTGAAGAAGTCCTACATGGTGATCTTGACTTCACATCCGATCCATGGCCTAATATCTCCGAAGGTGCAAAAGACTTGGTCCGAAGAATGCTCATTAGAGACCCAAAGAAACGGCTAACAGCCCATGAAGTTCTCTGCCATCCCTGGATTATGACTGATGGTCTGGCTCCTGACAAGCCTCTTGATCATTCCGTCATAACTCGCTTGCAGCAGTTCTCTGCCATGAACAAACTTAAGAAAATGGCCCTTAGAGTCATCGCTGAGAGACTGTCAGAAGAGGAAATCGCAGGGCTGAAGGAAATGTTCAGGATGATAGACACAGACAACAGTGGGCAGATTACATTTGAAGAACTTAAAGAGGGACTCAAAAAGTTTGGTGCCAACCTTGAGGAGTCTGAGATTCACCATCTCATGAAATCAGCCGATGTTGATAATAGTGGGGCGATTGATTACGGGGAATTCATAGCTGCTATGTTGCATCTCCACAGAGTCGATAAGGAAGATCATCTACTTGCAGCTTTCACCTACTTTGACAAAGATCGAAGTGGCTATATTACACGAGATGAACTTCAACAAGCTTGTCAAGAGTTTGGTGTAGAGGAAATTCATTTGGAAGACATTATTAACGATGTGGACCAAGATAAAGATGGACGGATAGACTACAATGAGTTTGTTGCCATGATGCAAAGAGGAAATGTTGACTTGGGTAAAAAAGGTGCACAGAAACCTTTCAGTGTTGCAGTTCAAGAGGCACTTCAGGTTCCTAACTACTCTCTTACATCAGGATGTTCACTTGATGTGTTACATGTTTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_191960.p1 GENE.R_Transcript_191960~~R_Transcript_191960.p1 ORF type:complete len:632 (+),score=135.79,Pkinase|PF00069.21|3.5e-73,EF-hand_1|PF00036.28|6.3e+03,EF-hand_1|PF00036.28|3e-09,EF-hand_1|PF00036.28|0.0003,EF-hand_1|PF00036.28|6.4e-06,EF-hand_1|PF00036.28|2.7e-07,EF-hand_7|PF13499.2|3.5e-12,EF-hand_7|PF13499.2|4.9e-12,EF-hand_6|PF13405.2|8.2e-07,EF-hand_6|PF13405.2|0.11,EF-hand_6|PF13405.2|4.9e-07,EF-hand_6|PF13405.2|0.004,Pkinase_Tyr|PF07714.13|2.1e-24,EF-hand_8|PF13833.2|0.00068,EF-hand_8|PF13833.2|7.3e-11,EF-hand_8|PF13833.2|0.91,EF-hand_8|PF13833.2|4.2e-09,EF-hand_5|PF13202.2|2.9e-06,EF-hand_5|PF13202.2|0.64,EF-hand_5|PF13202.2|0.00055,EF-hand_5|PF13202.2|0.0025,EF-hand_4|PF12763.3|75,EF-hand_4|PF12763.3|0.0012,EF-hand_4|PF12763.3|0.03,EF-hand_9|PF14658.2|0.0021,EF-hand_9|PF14658.2|10 R_Transcript_191960:726-2621(+)
MGNNCLSSLAKGAFWCKPPKQMIAESQKGDGKEKSSVDKNTDGLSDVQIKPPEVVKVGSKLGRQESRLGRQESRLGRQESRLGRQESRLGRQESRMGRQESRLTRQESKVLQPNVGGDAKNKPNVNVKRVASAGLQVQSVLRRKTGNLKDHYTLGKKLGHGQFGTTFLCVEKSSGKEYACKSIAKRKLVNREDVEDVRREIEIMHHLKGHPNVITIKDAYEDAVAVHVVMELCIGGELFDRIVKRGHYTERKAADLARTIVGVVEACHSLGVMHRDLKPENFLFVNEDEDSHLKTIDFGLSIFFKPGDIFHDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAETEEEIFEEVLHGDLDFTSDPWPNISEGAKDLVRRMLIRDPKKRLTAHEVLCHPWIMTDGLAPDKPLDHSVITRLQQFSAMNKLKKMALRVIAERLSEEEIAGLKEMFRMIDTDNSGQITFEELKEGLKKFGANLEESEIHHLMKSADVDNSGAIDYGEFIAAMLHLHRVDKEDHLLAAFTYFDKDRSGYITRDELQQACQEFGVEEIHLEDIINDVDQDKDGRIDYNEFVAMMQRGNVDLGKKGAQKPFSVAVQEALQVPNYSLTSGCSLDVLHVS*

Click here to download the sequence:
Link to NCBI Protein BLAST