Transcript Information: R_Transcript_192.p1


Annotated TAIR IDAT3G23590.1
Annotated Gene NameREF4-related 1
Annotated Gene Symbol(s)RFR1, MED33A
Annotation TypeOrtholog
Chromosome Positionchr3:8467638-8473469 | Forward length=1309
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1985165196417
Replicate 24.3319119318917
Replicate 35.7662567492783
Condition 2: 8 Hour
Replicate 16.937258874491
Replicate 27.5051330957582
Replicate 310.44658340739
Condition 3: 24 Hour
Replicate 17.9321150342512
Replicate 26.9888826296893
Replicate 38.253803741752


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192.p1 GENE.R_Transcript_192~~R_Transcript_192.p1 ORF type:complete len:1013 (+),score=176.85 R_Transcript_192:326-3364(+)
ATGGCCCCTGGATCCTTTGTACCTTCTGCTGCTCAATGGCATGGGGCTAGTTGCTCTGCACTTTGGCTTCCTATTGACCTGTTTCTAGAAGATTCTATGGAGCACATTACAGTGTCTCCAACATGTGCCATTGATACACTTACTGGAATTGTGAAATCACTTCAGGCACTGAACAGTACGACATGGCACGACACCTTCTTAGGTTTGTGGATTGCAACTTTGCGTCTTGTTCAAAGGGAGAGGAATCCTTATGAGGGTCCTGTCGCTCGCCTTGACAGTTGCCTCTGCATGCTGCTATCCATTGTACCTCTTGTGCTTGTTAATCTTATCGAGGAAGAACAATCTACGCTAGACAAGGAGTCTGAGTTTGGTGTAAAGGAGGATAAAGAGATTTATGGAAGTCGTCGCTGTCAGTTGGTTTGCAGTTTACAGTTGTTAGGTGAATATGAAGGGTTGTTAACTCCACCGTCACTTATTGCCCCGTTAGCCAATCAGGCTGCAGTGAAAGCAGTATTGTATCTTTCAGGCTTCAATATTGGCAGTGGTTACCTTGATTCTGTCAACATCAATGATGTGCCGATGAACTGTGCTGGAAATCTGCACCATTTGATTGTTGAAGCTTGCATTGTTAGAAATTTATTGGACATCTCAGCATATATGTGGCCTGGTTATGTGAATGCGCGTGTCAGTCAGATACCTTGTGGTGTTGCTGGACAAGTTACTGGTTGGTCATCATTAATGAAAGGTTCTCCCCTTAGTTCCACAATGGCAAATAGTCTAATTTCCACTCCTGCTTCAAGCTTAGCAGAGATAGAGAAAATCTATGAGATTGCAGTTGGGGGTTCAGATGAAGAGAAGATGCGAGCCGCTACTGTTTTATGTGGGGCATCTCTCGTTCGTGGTTGGAATGTACAGGAGCACGTAGTAGTCTTCATTCTGAGGTTGCTGTCACCTCTCAAGCCTGTGGAATATTCAGGAACTGACAGTCATTTAATTAGTTGTGGACCATTTCTGAATGTCATTCTTGTTGGGATAGCAACGATGGATATTGTTCAGATATTTTCACTCCATGGCTTGATTCCACAGCTTACTGGAGCATTGATGCCCATCTGTGAGGTTTTTGGCTCTTGTTCGCCCAAGGTTTCATGGACACTTTCAACAGGAGAGGAAATAAATGCCCATTGTGTGTTCTCTAATGCATTTACTCTCCTCTTGAAGCTCTGGCGTTTTGATCATACACCCGTTGAACAGTTGGGTGATGTGCCATCGGTAGTTTCACAGCAAAGTCCAGAGTATCTCCTCTTGGTGAGGAACTCTCAACTTGCCAATACAGCAATAGATCAGAATAGGAGCCAAAGGTTTACGAAATTGCTAAGTCCAATGCCAGCAGATCCGATATTTATGGATTCTTTCCCTAAACTGAAATGTTGGTACAGACAACATCAGGCCTGTATTGCTTCTCCACTTTCAGGTCTTACACCGGGCACCCCTGTCCATCAAATTGTTGAGGCTCTATTGACTATGCTCTTCAAGAAAATGAATAGAGGTACAACTTCTGGAAGTAGTAGTTCATCTGGTTCAGCACCAGAAGAGGTAGTTCAACGACTGCAGTTGCCAGCTTGGGATATTTTGGAAGCACTTCCTTTTGTGCTAGATGCTGCTTTAACAGCCTGTGCCAATGATAAGTTGTCTTCACGTGACCTAGCAACAGGGTTGAAGGACCTTGCCGATTTCCTTCCAGCATCGTTGGGAAGCATAATTAGCTACTTCTCAGCTGAAGTAACAAGAGGAGTCTGGAAGCCAGCTTCTATGAATGGAACTGATTGGCCAAGTCCTGCTGCTAATTTATCCACGGTTGAGCAACAAATTCAGAAACTGCTCGCTGCCACAGGAATTGATGTCCCTAGTCTATCAACAGTGGGCAACTCTATTCCTGTACTTCCGCTACCATTGGCTGCACTGCTGAGCCTTACCATTACATACAAACTTGATAAAGCTCATGAACGCTTCTTGAACTTGGTTGGTAAATCAGTGGTTGTATTTGCGGCTGGATGTCCTTGGCCTTGCCTACCCATTCTATCTTCACTGTGGGCTTTAAAGGCAAAGCGTTGGAGTGACTTCCTGATCTTCTCCGCCTCGCGCACCGTATTCAATCGTAACAATGATGCTGTCGTCCAACTTCTAAGGAGCTGTTTTTCCTCTGTCTTGGGACTCAAATCTTCCCCTTGGTGTAAAAGTGGAGGCGTTGGTGCTCTTCTTGGCCATGGCTTGGGCTCCCATTTCTCTGGTGGGATGTCTCCTGTTGCCCCCGGTATCTTCTACCTACGTGTGTACCCATTTGTCAGAGACTTGATACTCATGACCGAAGAAATTCTCTCTCTCCTCATGACTTCTGTCAGAGATATCGCTTCTTCTGGTTTATCAAGAGACTCCTTAGATAAACTGAAGAAAACCAAGTTTGGAATGAGATATGGGCAAGTTTCTCTCATGTCAGCAATGACACGAGTCAAGGTTGCAGCTTCTGTTGGGGCCTCGTTCATCTGGATAGCTGGTGGGTTAAACCTGGTACAGATGCTGATAAAAGAGATTCTTCCCTCTTGGTTTTTATCGACCCAGAGATCTGACCAGATTCGAGGAGACTCAGGAGGCACTGTCGCAACTTTGAGCGGTTATGCACTTGCGTACTTGGCATTGCTCACTGGGTTATTCTCATGGGGCACAGATGCATCATCCCCAGCCGCAAAATGGCGTCCCAAGGTCCTCACTTCCCACCTCCAATTTATGGCAACAGCCATCGAAGGTAAGGTCTCTCTCGGATGTGATTGGGCCACTTGGCGGGCCTATGTTTCTGGTTTCTTGAGCTTGATGGTCCGGTGCACTCCGGCATGGTTACTTGAGGTTGATGCTCATGTTTTAAAGAACCTAAGTAAAGGTTTGCAACAATGGAACGAAGAAGAATTGGCTGCGACCTTGCTTGAGGTTAGTGGCTTTAATGCAATGGGTGCTGCTGCCGAATTGATCATTCAAAGTGCTCGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192.p1 GENE.R_Transcript_192~~R_Transcript_192.p1 ORF type:complete len:1013 (+),score=176.85 R_Transcript_192:326-3364(+)
MAPGSFVPSAAQWHGASCSALWLPIDLFLEDSMEHITVSPTCAIDTLTGIVKSLQALNSTTWHDTFLGLWIATLRLVQRERNPYEGPVARLDSCLCMLLSIVPLVLVNLIEEEQSTLDKESEFGVKEDKEIYGSRRCQLVCSLQLLGEYEGLLTPPSLIAPLANQAAVKAVLYLSGFNIGSGYLDSVNINDVPMNCAGNLHHLIVEACIVRNLLDISAYMWPGYVNARVSQIPCGVAGQVTGWSSLMKGSPLSSTMANSLISTPASSLAEIEKIYEIAVGGSDEEKMRAATVLCGASLVRGWNVQEHVVVFILRLLSPLKPVEYSGTDSHLISCGPFLNVILVGIATMDIVQIFSLHGLIPQLTGALMPICEVFGSCSPKVSWTLSTGEEINAHCVFSNAFTLLLKLWRFDHTPVEQLGDVPSVVSQQSPEYLLLVRNSQLANTAIDQNRSQRFTKLLSPMPADPIFMDSFPKLKCWYRQHQACIASPLSGLTPGTPVHQIVEALLTMLFKKMNRGTTSGSSSSSGSAPEEVVQRLQLPAWDILEALPFVLDAALTACANDKLSSRDLATGLKDLADFLPASLGSIISYFSAEVTRGVWKPASMNGTDWPSPAANLSTVEQQIQKLLAATGIDVPSLSTVGNSIPVLPLPLAALLSLTITYKLDKAHERFLNLVGKSVVVFAAGCPWPCLPILSSLWALKAKRWSDFLIFSASRTVFNRNNDAVVQLLRSCFSSVLGLKSSPWCKSGGVGALLGHGLGSHFSGGMSPVAPGIFYLRVYPFVRDLILMTEEILSLLMTSVRDIASSGLSRDSLDKLKKTKFGMRYGQVSLMSAMTRVKVAASVGASFIWIAGGLNLVQMLIKEILPSWFLSTQRSDQIRGDSGGTVATLSGYALAYLALLTGLFSWGTDASSPAAKWRPKVLTSHLQFMATAIEGKVSLGCDWATWRAYVSGFLSLMVRCTPAWLLEVDAHVLKNLSKGLQQWNEEELAATLLEVSGFNAMGAAAELIIQSAR*

Click here to download the sequence:
Link to NCBI Protein BLAST