Transcript Information: R_Transcript_192141.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48674562545917
Replicate 20.13997533610865
Replicate 30.9162695038461
Condition 2: 8 Hour
Replicate 10.1632390996483
Replicate 20.89443527364742
Replicate 31.452128849631
Condition 3: 24 Hour
Replicate 11.0713643372929
Replicate 20.29407011854103
Replicate 31.0214262187219


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192141.p1 GENE.R_Transcript_192141~~R_Transcript_192141.p1 ORF type:3prime_partial len:150 (+),score=30.60 R_Transcript_192141:461-907(+)
ATGTGTCCGTATCGTGATTGGTTTGACTCCTATGAGAGCGTTGATGGTGGCACAGTCTATATGGGTAATGGTGCTACATGTAAGGTTGTTGGGAAAGGTAATGTCAAAATCAAAGTTCATGATGGAACTACCCGTACTCTTTTTGGGGTTAGACATGTTCCCGAACTTCGTAAAAACCTTATATCCCTTGGTACCCTTGATTCTTTGGGTTGTCGCTACTCCGCTCAAGGTGGAGTTCTTAAGGTATCTAAGGGTTCTCTTGTTTTGATGAAAGGCTCTAGAATTGGGTCTTTGTATGTTTTGCAAGGTTCTACCATCACAGGTTCTGCTGTTGTTGCTTCCACATCAAATTCCCAAGTGCAAGCATCTTCAAGCTCTCCTACTCCATCCATTCAACCTTCAATAGCTCGTTATCATGAGAAAAGAGCTCGCAAGGTACCGGAGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192141.p1 GENE.R_Transcript_192141~~R_Transcript_192141.p1 ORF type:3prime_partial len:150 (+),score=30.60 R_Transcript_192141:461-907(+)
MCPYRDWFDSYESVDGGTVYMGNGATCKVVGKGNVKIKVHDGTTRTLFGVRHVPELRKNLISLGTLDSLGCRYSAQGGVLKVSKGSLVLMKGSRIGSLYVLQGSTITGSAVVASTSNSQVQASSSSPTPSIQPSIARYHEKRARKVPER

Click here to download the sequence:
Link to NCBI Protein BLAST