Transcript Information: R_Transcript_192149.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22959699314112
Replicate 20.066026101938044
Replicate 30
Condition 2: 8 Hour
Replicate 10.1539991506116
Replicate 20
Replicate 30.057080536542097
Condition 3: 24 Hour
Replicate 10.21658308705381
Replicate 20
Replicate 30.13765852004338


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192149.p1 GENE.R_Transcript_192149~~R_Transcript_192149.p1 ORF type:5prime_partial len:318 (-),score=43.44,UBN2_2|PF14227.2|1.1e-19,UBN2|PF14223.2|2.1e-07 R_Transcript_192149:22-975(-)
CGTCTCTATACTCTGCGCCAAGATAAAGGTACATCTCTTAAAGAACATCTAGATGAGTTTAATTCCATCTTAGTTGATTTGGATAATTTGGATGTTACCATTGGTGATGAAGATAAGGTTGTTTTGTTGGTTGTGTCCTTGAACCCTGTGAAGTATAAACACTTCAAGGAGATCATGTTATATGGCAATAGGTCTACCCTAACTTTTCAAGAAGTTAAAATCAAACTATTTTCTAAAGAGAAATTTGATGCCGAACATGATAAAGATGATGACCCTAGAGATGTAGGGTTATATGCTAGAGGTAAGCCCTCTAATAAAAGTCGTGGTGGTAAAACCAAGTCTAAGGGAAATGACAACTCCCATGTAAATTGCAAGTATTGCAAGAAACCTGGACACGATGTTGATGATTGTTTTCAACTAAAACGTAAACTCGAGAAACAAGAAAAAGCCAAGGGTAAGAAACCATTAGAGTCTCCCGCCGAAGCGGGTGTTGTTGATAACCATTATGATGGTGATTTGTTAGTAGCCGTTGATTCCCATGACAAGGCTAATACTCAATGGATCCTTGACTCGGGTTGTACTTTTCACATGTGTCCATACCGTGACTGGTTTGACTCTTATGAGAGTGTTGAAGGTGGCATCGTTTACATGGGTAACGGTGCTACGTGTAAGGTTGTCAGGAAAGGAAATGTCAAAATTAAAGTCCATGATGGAACTACCTGTACTCTTTTTGGGGTTAGACATGTTCCCGACCTTTGTAAAAACCTTATATCCCTTGGTATCCTTGAATTTTTGGGTTGTTACTACTTCGCTCAAGGTGGAGTTATTAAAGTGTCTAAGGGTGCACTTATTTTGATGAAAGGCTCTAGAGTTGGGTCTTTACATGGTCTTACTACTAATTATGAAATTGATTTTTTTGTGAGAATTGCACCTATAGAAAGCAAAAGAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192149.p1 GENE.R_Transcript_192149~~R_Transcript_192149.p1 ORF type:5prime_partial len:318 (-),score=43.44,UBN2_2|PF14227.2|1.1e-19,UBN2|PF14223.2|2.1e-07 R_Transcript_192149:22-975(-)
RLYTLRQDKGTSLKEHLDEFNSILVDLDNLDVTIGDEDKVVLLVVSLNPVKYKHFKEIMLYGNRSTLTFQEVKIKLFSKEKFDAEHDKDDDPRDVGLYARGKPSNKSRGGKTKSKGNDNSHVNCKYCKKPGHDVDDCFQLKRKLEKQEKAKGKKPLESPAEAGVVDNHYDGDLLVAVDSHDKANTQWILDSGCTFHMCPYRDWFDSYESVEGGIVYMGNGATCKVVRKGNVKIKVHDGTTCTLFGVRHVPDLCKNLISLGILEFLGCYYFAQGGVIKVSKGALILMKGSRVGSLHGLTTNYEIDFFVRIAPIESKRE*

Click here to download the sequence:
Link to NCBI Protein BLAST