Transcript Information: R_Transcript_192501.p1


Annotated TAIR IDAT4G17380.1
Annotated Gene NameMUTS-like protein 4
Annotated Gene Symbol(s)MSH4, ATMSH4
Annotation TypeOrtholog
Chromosome Positionchr4:9708742-9714068 | Forward length=792
E-Value4.9E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24283318343307
Replicate 20.46554989836581
Replicate 30.66028290188466
Condition 2: 8 Hour
Replicate 10.27146191737522
Replicate 20
Replicate 30.20123736829697
Condition 3: 24 Hour
Replicate 10.96718034883898
Replicate 20.44012711755032
Replicate 30.19412598391927


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192501.p1 GENE.R_Transcript_192501~~R_Transcript_192501.p1 ORF type:complete len:451 (+),score=79.68,MutS_III|PF05192.14|3.1e-20,MutS_IV|PF05190.14|5.3e-13 R_Transcript_192501:595-1947(+)
ATGATCTTTTTGGCTCAGGGAGCTGTCTTGATTAAGAACTTGGCAGCAAAGGAGCCCTCTGCCCTTGGTCTTGATAGTTACTACAAGCAATACTATCTTTGTCTGGCAGCAGCAGCTGCTATTATCAAATGGACAGAAGCAGAAAAAGGGGTTATCATAACTAACCATTCTTTAGTGGTTACTTTTAATGGATCTTTTGACCATATGAATATTGATGCTACTAGTGTACAAAACTTGGAACTCATTGAGCCTTTGCATTCAAATCTTTTGGGCACAAGCAACAAGAAAAACAGTCTCTTCCATATGCTTAAGACAACAAGAACTACAGGAGGCACTAGACTTCTCCGTGCCAATCTTCTGCAACCTTTGAAAGACATTGAGACTATAAATGCTCGTCTTGATTGCCTGGATGAACTGATGAGGAATGAGCAACTCTTTTTTGGACTTTCTCAGGTTCTGCGGAAGTTTCCAAAAGAAACTGATAGAGTACTATGTCACTTTTGCTTCAAGCAGAAGAATGTCACAAACAAGGTTTTGGCCAACGACAGTGCTAAAAAGAGCCAAATAATGATATCAAGCATTATTCTTCTCAAAACTGCTTTAGAGGCCTTGCCTATGCTTTCAATGGTGCTCAAAGATGCAAAATGTTTTCTTCTTGGAAACATTTATAAGTCTATATGTGAGAATGAAGCATACGCTCTCATCAGACAAAGAATTTGTGAAGTGATAGATGAGGATGTCGTTTATGCGAGAGTTCCTTTCATTGGTCGAACACAGCAATGTTTTGCTGTCAAGGCTGGAATAGATGGACTGCTAGATGTCGCACGAAGGACATTTTGTGATACTAGTGAAGCTATACATAAGCTCGCAACCAAGTATCGTGAAGATTTTAAACTGCCAAATTTGAAACTTCCTTTCAACAATAGACAAGGGTTTTATTTGAGCATCCCTCAGAAAGAGTTCCAAGGAAAACTTCCGAGCAAGTTCATCCAGGTAGTGAAACATGGGAACAATCTACACTGCTCTTCCTTGGAACTAGCATCGCTGAATGCAAGGAACAAGTCCGCAGCTGCAGAATGTTGCATCAGAACAGAACTTTGCTTGGAAGCTCTAAATGATGCCATAAGGGAAGATGTATCTGTGCTCACACTGCTTGCAGAGGTGTTATGCCTTCTAGATATGGTTGTCAATTCATTTGCTCACATGATATCAACCAAGCCAGTTGATCGCTATATTAGGCCAGAATTCACAGGTACTGTAACATGGTTTGGGATCACGAAGTCTACAACAACAACTAAGCCTAAGTCCCAAACAGATTTGTGGTCAACTAACATGGAAAGTCACAAATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192501.p1 GENE.R_Transcript_192501~~R_Transcript_192501.p1 ORF type:complete len:451 (+),score=79.68,MutS_III|PF05192.14|3.1e-20,MutS_IV|PF05190.14|5.3e-13 R_Transcript_192501:595-1947(+)
MIFLAQGAVLIKNLAAKEPSALGLDSYYKQYYLCLAAAAAIIKWTEAEKGVIITNHSLVVTFNGSFDHMNIDATSVQNLELIEPLHSNLLGTSNKKNSLFHMLKTTRTTGGTRLLRANLLQPLKDIETINARLDCLDELMRNEQLFFGLSQVLRKFPKETDRVLCHFCFKQKNVTNKVLANDSAKKSQIMISSIILLKTALEALPMLSMVLKDAKCFLLGNIYKSICENEAYALIRQRICEVIDEDVVYARVPFIGRTQQCFAVKAGIDGLLDVARRTFCDTSEAIHKLATKYREDFKLPNLKLPFNNRQGFYLSIPQKEFQGKLPSKFIQVVKHGNNLHCSSLELASLNARNKSAAAECCIRTELCLEALNDAIREDVSVLTLLAEVLCLLDMVVNSFAHMISTKPVDRYIRPEFTGTVTWFGITKSTTTTKPKSQTDLWSTNMESHKF*

Click here to download the sequence:
Link to NCBI Protein BLAST