Transcript Information: R_Transcript_192571.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5208661314622
Replicate 20.36470000723098
Replicate 30.76734728920114
Condition 2: 8 Hour
Replicate 10.63796918597041
Replicate 20.58260362117233
Replicate 30.69813887001488
Condition 3: 24 Hour
Replicate 10.76905805849629
Replicate 20.49254920599304
Replicate 30.59743114529993


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192571.p1 GENE.R_Transcript_192571~~R_Transcript_192571.p1 ORF type:complete len:806 (+),score=41.82,RVT_1|PF00078.23|2.3e-27,RVT_3|PF13456.2|8e+03,RVT_3|PF13456.2|7.3e-18,rve|PF00665.22|1.1e+04,rve|PF00665.22|8.4e-13,RNase_H|PF00075.20|2e-06 R_Transcript_192571:1542-3959(+)
ATGATAAGAGAAGTAATGTACCCTGATTGGTTAGCTAATGTTGTAGTTGTGAAAAAGAAGAACGGAAAATGGAGAGTATGTGTGGACTACACGGATTTGAATAAAGCGTGTCCTAAAGATCCATTCCCCCTTCCTCACATAGATGCAATGGTAGACGCGACTGCAGGGCATGAAATGTTGACTTTCCTGGATGCCCAAAGTGGTTTTAATCAGATTCAAATGTATGGACTTGACCAGGAATGTACAGCATTCATGACCGAGCGCGGCATATATTGTTACAATGCTATGCCTTTTGGACTAAAGAATGCAGGTGCCACATATCAACGCCTAGTGAATATGATGTTCAAAGATCACTTGGGTGATACAATGGAGGTCTATATCGATGACATGGTAGTAAAATCCAAGTCAGCGAAAGACCACACCAAACACCTTGCCACATCATTTGACATACTGGAAGCATATAACATGAAGCTGAACCCCAGTAAATGCACCTTTGGGGTTTCCTCAGGAAAAATCTTGGGTTACATGGTAACGAAACGTGGGATAGAAGCGAGTCCTAAACAAATCAGAGCAATCCTGGGATTACAGTCACCTAAAACGGCCAAAGACGTACAATGTCTGACCGGCAGGGTAGCGGCACTCAATAGATTCGTTTCCAGATCCTCAGAAAGATGCAAACCATTCTATGATATCCTGAGGAAGAACCAGAAGTTTGAATGGACTGCCCAACACGAAGAAGCATTCCAGGACTTGAAGAAATACCTCAGCACTGCTCCACTTCTTTCCACTCCAAAACCAGGTGAACCTCTATTCCTTTATCTTTCAGTTACTAAAAACGTTGTGAGCGCGGTCCTAGTACGGGAAGAAGAAGGGAGACAATGCCCGATATACTACGTAAGTAAGAGTTTATTAGATGCGGAAACCAGGTATACTCATTTAGAAAGACTAGTTCTTGCATTAGTTACAGCATCAACTAAATTGCGTCCTTACTTCGAAGGACACCCCATACATGTGAAAACTAACTATCCTATTAAGTCAGTCCTGCGCAAGCCTGAACTTTCAGGAAGGATGGCAAAATGGTCAGTAAAACTCAGCACCTACCAGATTGAGTACGAGCCCAGAACTGCCATTAAATCGCAGGTGCTAGCAGATTTTGTTGCGGATTTCAGCCCAAAGCTAGAAGCCCAAGCAACTCAGGAGGTCCAGCAACTGGATGGGGACAGTACACCTCAGAAATGGACACTCTATACCGATGGCGCTGCCAACGTAAGGGGGACTGGATTGGGTATAGTGCTGAAATCCCCGCATGGGGACATCATACCTCAGGCCATCTGTTGTGAGTTCAAAACCACCAACAATGAAGCAGAGTACGAAGCACTGATCCTAGGTCTCAGCGCGGCGCTGGAACTTAAGGTAAAGTATATTGAGGTAAATTCTGACTCACTCCTTATTGTCAATCATGGAAGTTACACAGCCAAAGATTCTAAGATGTTAGCTTACTTAGAAAAAGTGAAAACCTTAGTAAATTTGTTTGAGAAATTCGAGTTAAAACAAGTACCTAGGGACCTTAACACCCAGGCAGATGCGTTAGCAACCCTAGGATCAAGCTGCAACCCTACTAATCTAAAGGCTATACCATTGGTACATTTGCTGACCCCTTCCATAGAAAAGACTACTGGCATAGCCACTAACATTTCTGAGCAAAACCTAGATATTGAGTGTTTAGCAGAACCAAGCTGGACCAAACCTTATATAGAATATCTCAAAGGACAGCACACTACAAAAGCAGACATAAAATCCAGGTCATTCAGAATGAAAGCCTCTAAATATATCTTGATAGATGATGTCTTGTTCAGAAAGTCAGCTGCAGGGCCGTACCTAAGATGTCTCGAACCTGACCAAGCCCAAGAGATCCTGAGAGAATTGCACGACGGTCATTGTGGGAACCATGCAGCAGGCAGAAGTCTCTCCATTAAAGCTCTTAGAATGGGATACTTCTGGCCTACAATGCGGAAAGACGCAATAGATTACGCGAAGAAATGTGATGCATGTCAGAAGCACTCTCCAGAAATGCACCAACCTCCAGAACCACTCCACACAGTATCAGCACCCTGGCCTTTCATGAAATGGGGGATGGACATTGTTGGCAAACTTCCACAAGTTCCAGGGCAAAGAGTGTTTATGTTAGCAATGACCGACTACTTCTCTAAATGGATCGAGGCAGAAGCATTCAGCCAAATAAGAGATAAGGAGGTAATATCATTTATAAAACGTAACATTATCTGCAGGTTCGGAATACCCCCAGAAATAGTATGTGACAACGGATCGCAATTCATAAGTGATCGGACAAGATCTTTCTGTGCTGAGTGGGGTATAGAATTGCACACCTCGACATCCTCAGGCAAACGGACAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192571.p1 GENE.R_Transcript_192571~~R_Transcript_192571.p1 ORF type:complete len:806 (+),score=41.82,RVT_1|PF00078.23|2.3e-27,RVT_3|PF13456.2|8e+03,RVT_3|PF13456.2|7.3e-18,rve|PF00665.22|1.1e+04,rve|PF00665.22|8.4e-13,RNase_H|PF00075.20|2e-06 R_Transcript_192571:1542-3959(+)
MIREVMYPDWLANVVVVKKKNGKWRVCVDYTDLNKACPKDPFPLPHIDAMVDATAGHEMLTFLDAQSGFNQIQMYGLDQECTAFMTERGIYCYNAMPFGLKNAGATYQRLVNMMFKDHLGDTMEVYIDDMVVKSKSAKDHTKHLATSFDILEAYNMKLNPSKCTFGVSSGKILGYMVTKRGIEASPKQIRAILGLQSPKTAKDVQCLTGRVAALNRFVSRSSERCKPFYDILRKNQKFEWTAQHEEAFQDLKKYLSTAPLLSTPKPGEPLFLYLSVTKNVVSAVLVREEEGRQCPIYYVSKSLLDAETRYTHLERLVLALVTASTKLRPYFEGHPIHVKTNYPIKSVLRKPELSGRMAKWSVKLSTYQIEYEPRTAIKSQVLADFVADFSPKLEAQATQEVQQLDGDSTPQKWTLYTDGAANVRGTGLGIVLKSPHGDIIPQAICCEFKTTNNEAEYEALILGLSAALELKVKYIEVNSDSLLIVNHGSYTAKDSKMLAYLEKVKTLVNLFEKFELKQVPRDLNTQADALATLGSSCNPTNLKAIPLVHLLTPSIEKTTGIATNISEQNLDIECLAEPSWTKPYIEYLKGQHTTKADIKSRSFRMKASKYILIDDVLFRKSAAGPYLRCLEPDQAQEILRELHDGHCGNHAAGRSLSIKALRMGYFWPTMRKDAIDYAKKCDACQKHSPEMHQPPEPLHTVSAPWPFMKWGMDIVGKLPQVPGQRVFMLAMTDYFSKWIEAEAFSQIRDKEVISFIKRNIICRFGIPPEIVCDNGSQFISDRTRSFCAEWGIELHTSTSSGKRTG*

Click here to download the sequence:
Link to NCBI Protein BLAST