Transcript Information: R_Transcript_192574.p1


Annotated TAIR IDAT3G01410.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:153650-155439 | Reverse length=294
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51923083678631
Replicate 20.50538141045794
Replicate 30.55136567518091
Condition 2: 8 Hour
Replicate 10.42863658550976
Replicate 20.88073495216924
Replicate 31.1121336922775
Condition 3: 24 Hour
Replicate 10.75353853044981
Replicate 20.24130480186627
Replicate 30.43104888880104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192574.p1 GENE.R_Transcript_192574~~R_Transcript_192574.p1 ORF type:5prime_partial len:457 (+),score=29.29,RVT_3|PF13456.2|3.6e+03,RVT_3|PF13456.2|2.1e-21,RNase_H|PF00075.20|1.8e-07,RNase_H|PF00075.20|1.6e+04 R_Transcript_192574:1-1371(+)
AGACAATGCCCGATATACTACGTAAGTAAGAGTTTATTAGATGCGGAAACCAGGTATACTCATTTAGAAAGACTAGTTCTTGCATTAGTTACAGCATCAACTAAATTGCGTCCTTACTTCGAAGGACACCCCATACATGTGAAAACTAACTATCCTATTAAGTCAGTCCTGCGCAAGCCTGAACTTTCAGGAAGGATGGCAAAATGGTCAGTAAAACTCAGCACCTACCAGATTGAGTACGAGCCCAGAACTGCCATTAAATCGCAGGTGCTAGCAGATTTTGTTGCGGATTTCAGCCCAAAGCTAGAAGCCCAAGCAACTCAGGAGGTCCAGCAACTGGATGGGGACAGTACACCTCAGAAATGGACACTCTATACCGATGGCGCTGCCAACGTAAGGGGGACTGGATTGGGTATAGTGCTGAAATCCCCGCATGGGGACATCATACCTCAGGCCATCTGTTGTGAGTTCAAAACCACCAACAATGAAGCAGAGTACGAAGCACTGATCCTAGGTCTCAGCGCGGCGCTGGAACTTAAGGTAAAGTATATTGAGGTAAATTCTGACTCGCTCCTTATTGTCAATCAAGTTAATGGGAGTTATACAGCCAAAGATTCCAAGATGTTAGCTTACTTAGAAAAAGTGAAAACCTTAGTAAATTTATTTGAGAAATTCGATTTGAAGCAAGTACCTAGAGACCTTAACACCCAAGCAGATGCGCTAGCAACCTTAGGATCAAGCTTCAACCCTACAAATCTCAAGGCAATACCATTGGTACATCTGCTGACCCCCTCGATAGAAAAGACTAATGGCATAATCACTAGCATTTCTGAGCACAGCCTAGATGATGAGTGTTCAGCAGAACCAAGTTGGACTAGACCTTATATAGAATATTTCAAAGGATGGCATACCACTGGAGCAGACACCAAATCTAGGTCATTCAGAATGAAAGCCTCTAAATATATCTTGATAGATGATGTCTTGTTCAGAAAGTCAGCTGCAGGGCCATACCTACGATGTCTTGAACATGACCAAGCCCAAGAAGTCCGGAGAGAATTGCATGACGGTCATTGTGGGAACCACGCTGCAGGCAGAAGTCTCTCCAACAAAGCTCTTAGAACGGGATACTTTTGGCCTACAATGCGAAAAGACGCAGTAGATTACGCGAAGAAATGTGATGCATGTCAGAAGCACTCTCCAGAAATGCACCAACCTCCAGAACCACTCCACACAGTATCAGCACCCTGGCCTTTCATGAAATGGGGGATGGACATCGTAGGCAAGCTCCCACGAGCTCCAGGACAAAGAGTGTTCATGCTAGCAATGACCGATTACTTCTCTAAATGGATCGAGGCAGAAGCATTCAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192574.p1 GENE.R_Transcript_192574~~R_Transcript_192574.p1 ORF type:5prime_partial len:457 (+),score=29.29,RVT_3|PF13456.2|3.6e+03,RVT_3|PF13456.2|2.1e-21,RNase_H|PF00075.20|1.8e-07,RNase_H|PF00075.20|1.6e+04 R_Transcript_192574:1-1371(+)
RQCPIYYVSKSLLDAETRYTHLERLVLALVTASTKLRPYFEGHPIHVKTNYPIKSVLRKPELSGRMAKWSVKLSTYQIEYEPRTAIKSQVLADFVADFSPKLEAQATQEVQQLDGDSTPQKWTLYTDGAANVRGTGLGIVLKSPHGDIIPQAICCEFKTTNNEAEYEALILGLSAALELKVKYIEVNSDSLLIVNQVNGSYTAKDSKMLAYLEKVKTLVNLFEKFDLKQVPRDLNTQADALATLGSSFNPTNLKAIPLVHLLTPSIEKTNGIITSISEHSLDDECSAEPSWTRPYIEYFKGWHTTGADTKSRSFRMKASKYILIDDVLFRKSAAGPYLRCLEHDQAQEVRRELHDGHCGNHAAGRSLSNKALRTGYFWPTMRKDAVDYAKKCDACQKHSPEMHQPPEPLHTVSAPWPFMKWGMDIVGKLPRAPGQRVFMLAMTDYFSKWIEAEAFS*

Click here to download the sequence:
Link to NCBI Protein BLAST