Transcript Information: R_Transcript_192676.p1


Annotated TAIR IDAT3G57230.1
Annotated Gene NameAGAMOUS-like 16
Annotated Gene Symbol(s)AGL16
Annotation TypeHomolog
Chromosome Positionchr3:21177710-21180671 | Forward length=240
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62581580416179
Replicate 20.71987315713022
Replicate 30.65447821703293
Condition 2: 8 Hour
Replicate 10.41975768480992
Replicate 20.63888233831959
Replicate 30.51861744629677
Condition 3: 24 Hour
Replicate 10.13118746987259
Replicate 20.88221035562309
Replicate 31.2507259821084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192676.p1 GENE.R_Transcript_192676~~R_Transcript_192676.p1 ORF type:5prime_partial len:175 (+),score=41.06,K-box|PF01486.13|6.5e-24,K-box|PF01486.13|25 R_Transcript_192676:2-526(+)
GCAAATGGGCATATGATCGATCATCCAATAGCAGGGCTTAGAAGCAGAAACAAGTATTGGCAAAGCGAGGCAGCCAACTTGAGGCAACAGCTGCAGTACTTGCAAGAAAGCCACAGGAGACTTATGGGACAAGAACTTTCTGGCTTGAGCATCAAAGATATACAGAGTCTGGAAAATCAGTTGGAAGCAAGCTTGAAGAATGTCCGCATGAGAAAGGACCAGCTGTTGTCTGATGAGATCAAAGAACTTAACCAAAGGTCTACATTGCAGGGGACTACCATTCATCAAGAGAATGTTGAACTATATAAGCAGGTTAATCTCATCCAACAAGAAAATTCCAAGCTGCAAAAGAAGGTGTATGGACAGCAAGGTTTAAATCAGACAGAGCAGCACCCACACATGTCATACAATGAGATGAATGGTTATAACATTAGTCCGCCAATTAATCTCCAGCTAAGCCAGCCAGAGCAGCAAAACAATGGAACATCTACAAAAACTATGAAGCTAGGATTGCAACTGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192676.p1 GENE.R_Transcript_192676~~R_Transcript_192676.p1 ORF type:5prime_partial len:175 (+),score=41.06,K-box|PF01486.13|6.5e-24,K-box|PF01486.13|25 R_Transcript_192676:2-526(+)
ANGHMIDHPIAGLRSRNKYWQSEAANLRQQLQYLQESHRRLMGQELSGLSIKDIQSLENQLEASLKNVRMRKDQLLSDEIKELNQRSTLQGTTIHQENVELYKQVNLIQQENSKLQKKVYGQQGLNQTEQHPHMSYNEMNGYNISPPINLQLSQPEQQNNGTSTKTMKLGLQLD*

Click here to download the sequence:
Link to NCBI Protein BLAST