Transcript Information: R_Transcript_192796.p1


Annotated TAIR IDAT3G19360.1
Annotated Gene NameZinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6707544-6708864 | Forward length=386
E-Value4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92330152689239
Replicate 20.73527900290538
Replicate 31.4261003950912
Condition 2: 8 Hour
Replicate 10.95275739094339
Replicate 20.43503661169622
Replicate 30.7769171860866
Condition 3: 24 Hour
Replicate 10.89329989212856
Replicate 21.1156356637257
Replicate 31.0219939931625


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192796.p1 GENE.R_Transcript_192796~~R_Transcript_192796.p1 ORF type:complete len:257 (+),score=52.18,zf-CCCH|PF00642.20|4.2e-09,zf-CCCH|PF00642.20|8.3,zf-CCCH|PF00642.20|3.9e-05,zf-CCCH_2|PF14608.2|0.00044,zf-CCCH_2|PF14608.2|1.1,zf-CCCH_2|PF14608.2|1.2,Torus|PF16131.1|0.00073,Torus|PF16131.1|0.56,Torus|PF16131.1|4.8 R_Transcript_192796:584-1354(+)
ATGGATAGTCCTTTATTTGCTTCGCAAGTTTCTATGCAACCTTGTGGGATGGGTGTTGTTCCTCAATGTCAGATTGAAGATCTAACTTCTAAGAAGCCAAGAACCATGCACAAGACTGTACTATGCAGGAATTTTATGGCAAAGGGTAGATGCAGATATGGGGAGAATTGCATTTTTGCTCATAGCCTTGGAGAAAAGAGGAGTAACCAACTTCAATGGCAGAATTCTGTCACTGCTGGAAAAATGGTTAGAAACTTGAATGTGGTTGAGAACACCTACAAAAGGGGAACCTGCAGGTTCATTTTCTCCAAGGGAGGATGTCCATATGGGAAATTGTGCATTTTTGGGCATCCAGAGCTAGAGAATTCTGAGGATGAGCGAGGCATGACTTGGGATAGTTCTGTTATCAGCATTAAGACAGCTGATTCAAGTTCGAAAACTGATCCTCGGTCCAAGGCCAAGCTATGCCACCAATGGACGATGTTCAGTAGTTGTGATTATGGTGCAAAATGCGTTTACGCCCATGGACAACAAGAGTTGAAGGGATCTTCCCCCTCTTTTGCTTCAGAATACGGGAGTACATGGATTCCTCCAAGAACCTGGAAGAACGATGCCTTACCTTATAATGTAGGGGGAAAAAGTGATCAGCAGAAAGCGCCACAAAATACATGCTTACTCAAATGGAAAAGGATGAGGAAGATTGCTGGGATTTATGCTGATTGGATTGATGACGAATCCCCCTTGCTCTGCTCAGTTAGTGAGCAAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192796.p1 GENE.R_Transcript_192796~~R_Transcript_192796.p1 ORF type:complete len:257 (+),score=52.18,zf-CCCH|PF00642.20|4.2e-09,zf-CCCH|PF00642.20|8.3,zf-CCCH|PF00642.20|3.9e-05,zf-CCCH_2|PF14608.2|0.00044,zf-CCCH_2|PF14608.2|1.1,zf-CCCH_2|PF14608.2|1.2,Torus|PF16131.1|0.00073,Torus|PF16131.1|0.56,Torus|PF16131.1|4.8 R_Transcript_192796:584-1354(+)
MDSPLFASQVSMQPCGMGVVPQCQIEDLTSKKPRTMHKTVLCRNFMAKGRCRYGENCIFAHSLGEKRSNQLQWQNSVTAGKMVRNLNVVENTYKRGTCRFIFSKGGCPYGKLCIFGHPELENSEDERGMTWDSSVISIKTADSSSKTDPRSKAKLCHQWTMFSSCDYGAKCVYAHGQQELKGSSPSFASEYGSTWIPPRTWKNDALPYNVGGKSDQQKAPQNTCLLKWKRMRKIAGIYADWIDDESPLLCSVSEQE*

Click here to download the sequence:
Link to NCBI Protein BLAST