Transcript Information: R_Transcript_19285.p1


Annotated TAIR IDAT3G16730.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5695633-5698863 | Reverse length=683
E-Value1.7E-188
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.445379342911
Replicate 26.4113160460765
Replicate 310.342839551374
Condition 2: 8 Hour
Replicate 110.524315324648
Replicate 212.070345769555
Replicate 317.862655892711
Condition 3: 24 Hour
Replicate 115.548847731643
Replicate 210.660573761871
Replicate 315.742676164093


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19285.p1 GENE.R_Transcript_19285~~R_Transcript_19285.p1 ORF type:complete len:691 (+),score=193.37,CNDH2_C|PF16858.1|1.7e-48,CNDH2_N|PF06278.7|3e-38,CNDH2_M|PF16869.1|1.1e-26,CNDH2_M|PF16869.1|1.7e+03 R_Transcript_19285:502-2574(+)
ATGGATAAAGACACCCGAGACCCTAGTACTAGTAGTAGTAAAATTCATACAGTTCAGCCACTTAAAGACCTTGAATCGAATTGGGCAGTGGATCTTGCAAAACGTCTTGAAGATTATCTTTTGAAGATTTGTTCTGGTGAAATTACTGCAGACAATGATGATGCCCATTTCTCCGTAAACTTTGCTGAAGCTGCTTTGTTGCTTCAAGGGTCAATACAAGTGTATAGTAGGAAAGTTGAGTATCTTTACAACTTGGTGTTGCACGCTTTGGAGTTCATTTCTCAGACAAGATCACAAGAGCATGTCGAGAGTACTTCAATCCAGCCTGAAGCAAGTTCTTCTCGTGCAACTCATGATGAGGATGACAAGTTCTGGGTCTTGGATGATATTCCAGTGGATGCTAAAAACTGCTTAGACAACGTAACCAACAAAAATACATCTGTGGACCACTTCATAAAGCCTCCTACAAATCTTGTTGTACATGAAGGCGAGTGTTTGGAATCCACCGCTGATGGAGAGCTGGAAACATATCTGCTGGCCACCACCAATCTCTATCGTGATTTCATCTTGTTAGACCCTTGTGATGAAGTGGCAGTTGATGAGTATCTGAAGGGTGATAAATCTGGTGAAGGGCAATATGGTGGCTATCGAGGGAGCTCTTTGATCTCAAAAGCTCATAGAAGTTTTCTTTCTCCTGCCAGCAGACAATCTGGAGGGACCGCCCGCAAGTCATCTGTCAAGAGAGGACAGGGTATCAGCCAGGCTTCACCAGGTGGCGGTGGTGGTGTTGAAATTCCCAAACATGATTTCGAAGCTGGTCCTTCTAATTTTGTTATCCCTGATAATGGAGACCATGGATTTGAATCAGATGATCAGCATTCTCAATATGGGAATTTGTATGAATCTGATGGTGATGGTGATGATGATGATGATGATCCTTGGAAGCCGTTAAATCCTCATGAAGCTGGAAACTTAAAAGTGAAGCCTTTCAAAAAAGTTAATGTTCGCAGGAGGTCTGGGATGACAAAGCACAACAACATTATTTCTCAATTTCCCATTGCAAAGTTGCATGGAACGATTAATCCAGAGCTTACAGAAATTTGGGAGACGCAACTACGTGTTCACAATAGACAAGAATCCCAACCACCTCCATTGTATGAGAAGCTGCGGAAATCCCTTGCTGATGGTGGAACAAGTCCTGATACCTCAATCCCTCTTGAGGATGGTGATGCAGAAAACATTTTTGATGATTTTGACCATCCTGATTTTGACCAAACTGATTTTGACATACCAGAGATGACTTACATGGATGAAGTAAATAGTCAGCCAGATAATCATGATTATTTTGCTGATAAATGTGACAATGGAAATGCTGCCGTCAATGAGGATCCCAATTCTCAAGCAAGCCTGGAAGACCTTTGTTGTGCTCACCTGGATGCCCTTCTTGCTAGCATAGCTGAGAATGAGAAGCAGACTGAATTGGCTGCTCGAGTTTCAACATGGAAGCAGAGAATTGAAAACGACTTGGAGGTGGAAGATTTACGGCCAGGATTTGACATACATGAGTATGGTGAGACGGTTTTGGACAAACTATCTCTAGAGGAAGGTGAAAATGTCATGTCCTTCACTGATGTCGTGAAAGGGAAAGAAAAACACGATGTTGCTCGGACCTTTTCTGCACTCCTGCAGCTGGTGAATGACCGAAAAGTTGATCTTAATAGAAGTGATTCAGCTGGTGATTCTTTCTGCTACACAGCTGTGGATCCATTCTATGTTCGGCTTCTCAGCCACGAGAAGGGACCCAAAAAAAGGCAAGATCAGCCGACAAAGAAGAGGCAAAAATCTCCCGTTGAGAAGGGATGCAGGAAAGGTGAGATGGATCTTCTGGTTAAACAGCCATCCGTTGTCAGCTCATCGTCATCCGGATGTAAATCAACACCTGTTTTAGCACAACCAAATTGCAAATCCTCTATGAAGCTGGGAAAAAGTGGGGTATTAAGGCGTACCCCAGATGGGAAGCGTAGGCGAAGATCTCGGTTAGTTGGGTCCTTTGACTTGAGTTCAGCAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19285.p1 GENE.R_Transcript_19285~~R_Transcript_19285.p1 ORF type:complete len:691 (+),score=193.37,CNDH2_C|PF16858.1|1.7e-48,CNDH2_N|PF06278.7|3e-38,CNDH2_M|PF16869.1|1.1e-26,CNDH2_M|PF16869.1|1.7e+03 R_Transcript_19285:502-2574(+)
MDKDTRDPSTSSSKIHTVQPLKDLESNWAVDLAKRLEDYLLKICSGEITADNDDAHFSVNFAEAALLLQGSIQVYSRKVEYLYNLVLHALEFISQTRSQEHVESTSIQPEASSSRATHDEDDKFWVLDDIPVDAKNCLDNVTNKNTSVDHFIKPPTNLVVHEGECLESTADGELETYLLATTNLYRDFILLDPCDEVAVDEYLKGDKSGEGQYGGYRGSSLISKAHRSFLSPASRQSGGTARKSSVKRGQGISQASPGGGGGVEIPKHDFEAGPSNFVIPDNGDHGFESDDQHSQYGNLYESDGDGDDDDDDPWKPLNPHEAGNLKVKPFKKVNVRRRSGMTKHNNIISQFPIAKLHGTINPELTEIWETQLRVHNRQESQPPPLYEKLRKSLADGGTSPDTSIPLEDGDAENIFDDFDHPDFDQTDFDIPEMTYMDEVNSQPDNHDYFADKCDNGNAAVNEDPNSQASLEDLCCAHLDALLASIAENEKQTELAARVSTWKQRIENDLEVEDLRPGFDIHEYGETVLDKLSLEEGENVMSFTDVVKGKEKHDVARTFSALLQLVNDRKVDLNRSDSAGDSFCYTAVDPFYVRLLSHEKGPKKRQDQPTKKRQKSPVEKGCRKGEMDLLVKQPSVVSSSSSGCKSTPVLAQPNCKSSMKLGKSGVLRRTPDGKRRRRSRLVGSFDLSSAR*

Click here to download the sequence:
Link to NCBI Protein BLAST