Transcript Information: R_Transcript_192916.p1


Annotated TAIR IDAT4G19890.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10786948-10789053 | Reverse length=701
E-Value3.4e-312
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61874443914301
Replicate 20.26690212393599
Replicate 30.4206039389124
Condition 2: 8 Hour
Replicate 10.27667644008187
Replicate 20.63166332884705
Replicate 30.82041177945252
Condition 3: 24 Hour
Replicate 10.81065703487656
Replicate 20.90339337263664
Replicate 30.77287092820965


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192916.p1 GENE.R_Transcript_192916~~R_Transcript_192916.p1 ORF type:complete len:708 (+),score=96.07,PPR_2|PF13041.2|9.5e+02,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|1.8e-07,PPR_2|PF13041.2|3.4e-14,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|1.3e-20,PPR_2|PF13041.2|1.5e-14,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|3.4e-10,PPR_2|PF13041.2|8.4e-17,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|0.41,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|7.8e-11,PPR_1|PF12854.3|9.8e-12,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|6.2e-08,PPR_1|PF12854.3|5.6e-10,PPR_1|PF12854.3|0.064,PPR|PF01535.16|15,PPR|PF01535.16|1.1,PPR|PF01535.16|0.023,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.0098,PPR|PF01535.16|0.00014,PPR|PF01535.16|1e-05,PPR|PF01535.16|4.2e-09,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.0013,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|0.43,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|0.00097,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.6e+04 R_Transcript_192916:88-2211(+)
ATGTTTTCTCTCCTTCCTCTCAGATCCCACAAACCCAAAAGAACCACACCAATTCTCTCAAATCTCTTCACTCTCAACCCCTTTTCTCTCCACACTCACCACCTTCCTATTAATCTTCAACGTTTCTACACCAACCCAATTTCTACTCCTGCACAATCCCTTGTCAAGAAAGTATCTTTACAAGTCCTCCAATCATACCACCAACAAACCCACCTTAAATTTTCACCTACCAAGCTAAACCTTGACTTAGACCTTGAATCTTTATCCCATGATAATGTTATTACGATCATTGCCTCCCTTGCTGATGAGGCTGGCTCAATGGTAGCATTAAGTTTCTTTGATTATGCAATTGGGTTTTCCAAATTTAGACACTTTATGCGCCTTTATATCGTTTTAACTACTTCTTTGATTAACAATGGCAATTTTGAGAAAGCCCATTGGGTAATGATGTGTATGGTTAGGAACTTTGCAGAAGTTGGGAGGTTTAAGGAAGCTGTTAGTATGGTGATTGAGATGCATAATCAGGGTTTGAACCCAAGTTGTCATTCTTTGAATTGTATTATTGGGATTGCTTGTGAAATGGGATTAGTTGAATATGCAGATCATGTGTTCGACGAAATGTCTCAGAGAGGCGTACGTCCAGATTCTTGTAGTTATGTTACTATGATTGCGGGTTATTGTCGAAAAGGGGAGGTTTCGGAGGTAGATAAGTGGTTGAGTAGAATGATTGAGCAAAAATTTGTTGTTAATAACTCGGCTTGTACTTTGGTGATCAGCACATTTTGTTGTGTGGGTAATGTTAGTAGGGCATTTTGGTTTTTGAATAAGATGATGGAGTTGGGGTTTAGGCCGAATTTGATCAATTTCAGTGCTTTGGTAGATGGATTATGTAATAGGGGTAATATTAAGCAAGCTTTTGAAACATTGGAGGAAATGGTCAGGAGAGGGTGGAAACCGAATGTGTATATGCATACAACTTTGATTAATGGACTTTGTAAGAAGGGATGGACTGAGAAGGCATTCCGGCTATTTCTTAAACTCGTAAGGAGTGATAACTATAAGCCAAATACATGTACCTATAATGCCATGATCAATGGGTATTGCAAGGATGAGAAATTGAACCGAGCAGAGATGCTATTCGGCAGAATGAAAGAGCAAGGATTAGTACCAGATGTTCACACTTACACTATCCTCGTAGATGGGCACTGTAAAGCTGGGAACTTCGGAAGAGCATATGAGTTGATGGATGTCATGACAGATGAAGGGTTTGCTCCTAATATTTGTACATACAATGCAGTTGTAAGTGGTCTCTGCAAGAAGGGAAGGTTACAGGAAGCTTATAAACTGCTTAGGGAGGGCTTTCATCAAGGACTGCTAGCTGATAGAGTCACGTACACAATTCTCATGTCTGCTTCAGCCAAGCACAATGATACTAAGGAGGCCTTGGCATGGTTTGGTAAAATGACTAAAGCAGGCTTTGAGGCTGATATATACATTTATAACATCCTGATTGCCTCTTTCTGTAGGGAAAAAAGGATGGAAGATGGTGAATGGTGGTTTCAGAAAGCAATAAAATTTCACCTTGTTCCGACTAAGGAAACTTACACCTCCATGATAAGTGGATATTGTGAGGAGGGAAATGTTGACTTGGCCAAAAAGTATTTCAGTAAGATGAGTGATCATGGTTGTCAACCAGATAGTTTTACTTATGGTTCTTTGATCAGTGGACTATGCAAACAAAGCAAACTAGAAGAGGCTCACAAGCTGTACAATGCGATGATTGACAAGGGGCTTTCCCCTTGTGAAGTGACTCGAGTAACTCTATCGTACGAGTACTGCAAAAATGATGATTCGTGCAATGCTATGGCCACCTTGGAACGGTTGGAGAAAAAGCTTTGGGTTAGGACGGTGACTACATTGATCAGGAAGCTCTGTAGTGACGGAAAAGTAGACATGGCAGCATTGTTCTTGCATAAGTTGTTGGATATGCAGGCAAATGCTGACCGCGTGACTGTGGCAGCATTTATGACTGCATGTTATGAAAGCGACAAGTATGAGCTTGTTTCTGCTTTTTCTGAGAGGCTTTTGTTAAAGGGATATGAAAGACATCAAAAATTGGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192916.p1 GENE.R_Transcript_192916~~R_Transcript_192916.p1 ORF type:complete len:708 (+),score=96.07,PPR_2|PF13041.2|9.5e+02,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|1.8e-07,PPR_2|PF13041.2|3.4e-14,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|1.3e-20,PPR_2|PF13041.2|1.5e-14,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|3.4e-10,PPR_2|PF13041.2|8.4e-17,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|0.41,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|7.8e-11,PPR_1|PF12854.3|9.8e-12,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|6.2e-08,PPR_1|PF12854.3|5.6e-10,PPR_1|PF12854.3|0.064,PPR|PF01535.16|15,PPR|PF01535.16|1.1,PPR|PF01535.16|0.023,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.0098,PPR|PF01535.16|0.00014,PPR|PF01535.16|1e-05,PPR|PF01535.16|4.2e-09,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.0013,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|0.43,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|0.00097,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.6e+04 R_Transcript_192916:88-2211(+)
MFSLLPLRSHKPKRTTPILSNLFTLNPFSLHTHHLPINLQRFYTNPISTPAQSLVKKVSLQVLQSYHQQTHLKFSPTKLNLDLDLESLSHDNVITIIASLADEAGSMVALSFFDYAIGFSKFRHFMRLYIVLTTSLINNGNFEKAHWVMMCMVRNFAEVGRFKEAVSMVIEMHNQGLNPSCHSLNCIIGIACEMGLVEYADHVFDEMSQRGVRPDSCSYVTMIAGYCRKGEVSEVDKWLSRMIEQKFVVNNSACTLVISTFCCVGNVSRAFWFLNKMMELGFRPNLINFSALVDGLCNRGNIKQAFETLEEMVRRGWKPNVYMHTTLINGLCKKGWTEKAFRLFLKLVRSDNYKPNTCTYNAMINGYCKDEKLNRAEMLFGRMKEQGLVPDVHTYTILVDGHCKAGNFGRAYELMDVMTDEGFAPNICTYNAVVSGLCKKGRLQEAYKLLREGFHQGLLADRVTYTILMSASAKHNDTKEALAWFGKMTKAGFEADIYIYNILIASFCREKRMEDGEWWFQKAIKFHLVPTKETYTSMISGYCEEGNVDLAKKYFSKMSDHGCQPDSFTYGSLISGLCKQSKLEEAHKLYNAMIDKGLSPCEVTRVTLSYEYCKNDDSCNAMATLERLEKKLWVRTVTTLIRKLCSDGKVDMAALFLHKLLDMQANADRVTVAAFMTACYESDKYELVSAFSERLLLKGYERHQKLA*

Click here to download the sequence:
Link to NCBI Protein BLAST