Transcript Information: R_Transcript_192942.p1


Annotated TAIR IDAT3G15250.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits to 218 proteins in 63 species: Archae - 0; Bacteria - 22; Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5136503-5137183 | Reverse length=226
E-Value1.4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85180484455354
Replicate 20.69987668054327
Replicate 30.3054231679487
Condition 2: 8 Hour
Replicate 10.40809774912075
Replicate 20.44721763682371
Replicate 30.18151610620387
Condition 3: 24 Hour
Replicate 10.22957807227704
Replicate 20.73517529635258
Replicate 30.36479507811495


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_192942.p1 GENE.R_Transcript_192942~~R_Transcript_192942.p1 ORF type:complete len:300 (+),score=25.67 R_Transcript_192942:86-985(+)
ATGGACACCCTACGAGATAAGCTTAATGATCACCACCACAACGATGACACCGCGACGTCGTCACCGTCGCCGGAGATGTTCTCATTCCCCGGCACCCCCGCCGAGGACGAAGGAGGGGAGTCCTCGTCCGAGTTCGAGTTTGGGTCGTGCGTCACCCCGGACTCCCCCGCCGTCAACAACGTCAGCAGCCGGAGCTCCGCCTCCCCGGCTGATCAATTCTTCTTCAACGGCCGCCTCCTCCCCCACGACTTCCCCGTCGCCTCATCCGGGCCCACCACCAGCAGCCGGTCCTCCTTCTCTGGCAAGGACAATCTCAGTCCCAACAACAAGACCAACAACATGAACAACACGTTGATCAACCTGTCAAGAGGAACAAGCGTGGGGAGCAGCATGAGCAAGGATTCTCTAATGTCATCGAGAAGCAACAGCACCAACAGCCGGGGGAGCACGTGCAGCACGTGCAGCAGTGCTAGGACTAGCTCAACCGAAGTTTCCGAAAGGCGCACGTTCCAGCAGAAACGCATTAAGGCTGCTAGTGTAAGAGATGATCATCAACACCACCACCAACAACGGAACGTCTCATCTACGACGGCGTTGGGTCAGTGTCAGTACTATCAATTTGGTGGGTCGTCAAGGAGATGGCATTTCATCACCCCTGCCCCCGTACTGGGCCCCAGTCGCTCCAGACAGAGCGTGGGGCCCACCACGAGTCCCAGGAGTAAGAAGAGAGGTCAAGAGAGAAAGAGAAGTGATAGTCATAATAATGATAGTAATAATGAAGGGTTTTTGCAAAGGATGTTGAGATCTTTTGTGGCAACATGTAAGGCTTGCCATGCTATGGAGGAGGGTCATGAAAATGAGTTTGATGATCTGGATCATGGAGTTGTATTGGGGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_192942.p1 GENE.R_Transcript_192942~~R_Transcript_192942.p1 ORF type:complete len:300 (+),score=25.67 R_Transcript_192942:86-985(+)
MDTLRDKLNDHHHNDDTATSSPSPEMFSFPGTPAEDEGGESSSEFEFGSCVTPDSPAVNNVSSRSSASPADQFFFNGRLLPHDFPVASSGPTTSSRSSFSGKDNLSPNNKTNNMNNTLINLSRGTSVGSSMSKDSLMSSRSNSTNSRGSTCSTCSSARTSSTEVSERRTFQQKRIKAASVRDDHQHHHQQRNVSSTTALGQCQYYQFGGSSRRWHFITPAPVLGPSRSRQSVGPTTSPRSKKRGQERKRSDSHNNDSNNEGFLQRMLRSFVATCKACHAMEEGHENEFDDLDHGVVLGN*

Click here to download the sequence:
Link to NCBI Protein BLAST