Transcript Information: R_Transcript_19306.p1


Annotated TAIR IDAT2G40360.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16853123-16856635 | Reverse length=753
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.716722705036
Replicate 228.610958700609
Replicate 341.598635474613
Condition 2: 8 Hour
Replicate 147.698464917234
Replicate 248.418762813447
Replicate 364.329308038651
Condition 3: 24 Hour
Replicate 169.148915369845
Replicate 261.225398680243
Replicate 372.200241860512


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19306.p1 GENE.R_Transcript_19306~~R_Transcript_19306.p1 ORF type:complete len:750 (+),score=160.22,BOP1NT|PF08145.8|3.2e+03,BOP1NT|PF08145.8|1.4e-93,WD40|PF00400.28|2.9e-07,WD40|PF00400.28|9.5e+03,WD40|PF00400.28|2.8e+03,WD40|PF00400.28|5.6e+02,WD40|PF00400.28|4.5e+02,WD40|PF00400.28|0.48,WD40|PF00400.28|0.015 R_Transcript_19306:197-2446(+)
ATGAAGGTCCCAAAGAAAGTAGCCACGGCCAGGAGTAAGGGTAAGGGTAAGGAAAATAAGAAGGAAAACGATGAGGAACCTAAGGTCACTAAGAAAGCTACAATGGCGGCGACTACTAAGAATGTGAAAAAGAAGGAGAAACAGAAGAGTATTGAGGAGCAAAAAGTGAACAAACGGTTGCAGAAGCTTGGACTACGTCATCAACAGGAAGAAGAACCTCATCATTCGGATTATTCTGAAGTGAGTGAACCTGTGGATAGCGATGCCGGTTCTTCTGAAGATGAGTTACGTGGAGCTCATTCATTCTATGGTAGTGACCATAGTCACAAGGCTAATGGTGCAAATACTAGTGACGGTGACGAGGATGATGCCTATTATTCTGTGGAAGAGAGTGATTCATCTGATGATGAGGTTGCTCCTCGGAATACAATTGGCGATGTTCCTTTAGAATTTTACAAAGATGAGGAACATATTGGATATGAAATTACCAGGAAGAAGATCAAGAAGGAGAGGGAAGATAAACTCCAAAAATATCTTAGAAGTGCTGATGATAAGAAAGCCTGGCGGACGATTATAGATGAACACAATGACGAAGAAGTGTACTTGACAAAAGATCAGATTAAGCTGTTTTACCGTATGTCGAAAGGGAAGACTCCACACGCTGATGTGAATCCTTATCAGGATTATCTAGACTGGTTTGATCATGAAGACAAGGGTCATCCATTATCAAATGCACCAGAACCAAAGGGACGATTCATACCCTCAAAGTGGGAGCACAAACAGATCCTCAGGTACGTGAGGGCCATTCGTGCGGGCAGAATCAAGTTTGATAAACCCAAGGAAGAGCCAAGTGTCTATCTATTATGGGGTGATGACTCTGGTTCATCGGAAAAGACTAGGGGATTGTCTTATATTCCTCCTCCAAAACCTAAACTGCCTGGCCACGAGGAATCTTATAATCCTTCTTTAGAATACATACCAACACAAGAAGAAATCAATTCTTACCAGTTGATGTACGAGGAGGACAGGCCTAAATTCATTCCCAAGAGGTTCACATCTTTGAGAAGTGTCCCAGCATATGAGAACTTTACCAAGGAGATTTTTGACCGTTGTTTGGACTTGTATCTTTGTCCTAGAGTTCGTAAGAAACGTATTGATATCGATCCTGAAACCTTAAAGCCTAAAACACCAAATCGTAAAGATCTTAAGCCTTATCCCGTTACATGTTATATTGAGTACAAGGGACACAATGATGCTGTTGTGTCTATTTCGATCGATGCTTCTGGCCAATGGATGGCTTCTGGTTCAACTGATGGAACTGTACGTCTTTGGGAGGTTGCCACTGGTAGATGCATCCGTGTCTGGGAATTTGGTGATGCTGTACGACATGTTGCATGGAATCCTGTACATGAGCTTTCAATATTGGCAGTCTCTGTGGGTCAAGATGTATTTATTCTAGATACTGGGTTGGGGAGTGAAGTAGAGCAGAAGAAGATTAAAGAACTCTTGCATATTGAGAAAGCTAATGTTCCAGATGAATCAGATAGCACATCTATTGCAAGCTGGCTTACTGATGACAAACGTGGAGGTCTAAGATTAAAGCATTTTAAGACTGTGTCTTCTATAGAATGGCATCGTAAGGGAGACTATCTGTCAACAGTGATGCCAGCAGCTGAATCTCGAGCTGTATTGATACACCAGCTCTCGAAGAAACTCACACAAAAGATCCCATTTAAGTTGCATGGAATTCCAGTGTGTGTAGCATTCCATCCATCTCGTTCCATTTTCTTCATTTCAACAAAGAAGGTTGTTCGTGTTTACGATTTGCTGAAGGAGAAACTGATCAAGAAGCTTGAGACCGGACTTCGTGAAGTTTCAAGCATTGCAATCCATCCCGGTGGTGACAATGTCATTGTTGGGAGCAAAGAAGGAAAGTTGTGTTGGTTTGACATGGATCTCCAATCTCGGCCTTATAGGGTCCTTAAGATTCACCCAAAGGATATCACAAATGTGGCCTTTCATCGTTCATATCCTCTGTTTGCATCATGCTCTGAAGATAACACGGCATATGTTTACCATGGCATGGTTTATTCAGATCTGAACCAAAATCCTCTAATTGTTCCATTGCAAATACTTCGAGGGCATTCTAGCTTGAAATCAAGAGGAGTTCTAGATTGTAAGTTTCATCCAAGGCAACCCTGGTTGTTCACTGCTGGTGCTGATTCAGTGATTAAACTTTATTGCCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19306.p1 GENE.R_Transcript_19306~~R_Transcript_19306.p1 ORF type:complete len:750 (+),score=160.22,BOP1NT|PF08145.8|3.2e+03,BOP1NT|PF08145.8|1.4e-93,WD40|PF00400.28|2.9e-07,WD40|PF00400.28|9.5e+03,WD40|PF00400.28|2.8e+03,WD40|PF00400.28|5.6e+02,WD40|PF00400.28|4.5e+02,WD40|PF00400.28|0.48,WD40|PF00400.28|0.015 R_Transcript_19306:197-2446(+)
MKVPKKVATARSKGKGKENKKENDEEPKVTKKATMAATTKNVKKKEKQKSIEEQKVNKRLQKLGLRHQQEEEPHHSDYSEVSEPVDSDAGSSEDELRGAHSFYGSDHSHKANGANTSDGDEDDAYYSVEESDSSDDEVAPRNTIGDVPLEFYKDEEHIGYEITRKKIKKEREDKLQKYLRSADDKKAWRTIIDEHNDEEVYLTKDQIKLFYRMSKGKTPHADVNPYQDYLDWFDHEDKGHPLSNAPEPKGRFIPSKWEHKQILRYVRAIRAGRIKFDKPKEEPSVYLLWGDDSGSSEKTRGLSYIPPPKPKLPGHEESYNPSLEYIPTQEEINSYQLMYEEDRPKFIPKRFTSLRSVPAYENFTKEIFDRCLDLYLCPRVRKKRIDIDPETLKPKTPNRKDLKPYPVTCYIEYKGHNDAVVSISIDASGQWMASGSTDGTVRLWEVATGRCIRVWEFGDAVRHVAWNPVHELSILAVSVGQDVFILDTGLGSEVEQKKIKELLHIEKANVPDESDSTSIASWLTDDKRGGLRLKHFKTVSSIEWHRKGDYLSTVMPAAESRAVLIHQLSKKLTQKIPFKLHGIPVCVAFHPSRSIFFISTKKVVRVYDLLKEKLIKKLETGLREVSSIAIHPGGDNVIVGSKEGKLCWFDMDLQSRPYRVLKIHPKDITNVAFHRSYPLFASCSEDNTAYVYHGMVYSDLNQNPLIVPLQILRGHSSLKSRGVLDCKFHPRQPWLFTAGADSVIKLYCH*

Click here to download the sequence:
Link to NCBI Protein BLAST