Transcript Information: R_Transcript_193298.p1


Annotated TAIR IDAT5G60030.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24172082-24172960 | Reverse length=292
E-Value8E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9235336631638
Replicate 24.3169963472762
Replicate 34.2816331955425
Condition 2: 8 Hour
Replicate 13.8902776084408
Replicate 22.9257228577252
Replicate 33.2231831942743
Condition 3: 24 Hour
Replicate 12.1455894605331
Replicate 23.7102304675738
Replicate 33.0683698159202


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_193298.p1 GENE.R_Transcript_193298~~R_Transcript_193298.p1 ORF type:3prime_partial len:107 (-),score=21.71 R_Transcript_193298:3-320(-)
ATGAAGACCGTGTCGGGGACAGTTGTATCCCCGAAGCCGGTATCTCTTTCAAAAGCAGCAAGAATTCTCTCGAAGTTTGTAGGTTCTGACAATTGTGCTTCCCCTTCATATCTTGCTTATTTGAGGCGTGCTTCAGAGTCGTTTGATGAGCTCGTTCAGGTCCACAAAGAGCTTAAAGGGAGCGGAGGGTCCGAGCTCAAAGGTAAGAAGACAAAGACGAAGCATAATGCTTCTTCCAGTGCTGTTTTGAATGAGGAGATTATTAGTCCTGTTGGTAAAAAAGAAGAAGACGTTTTTTTAGCTGATGAGAGTAGTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_193298.p1 GENE.R_Transcript_193298~~R_Transcript_193298.p1 ORF type:3prime_partial len:107 (-),score=21.71 R_Transcript_193298:3-320(-)
MKTVSGTVVSPKPVSLSKAARILSKFVGSDNCASPSYLAYLRRASESFDELVQVHKELKGSGGSELKGKKTKTKHNASSSAVLNEEIISPVGKKEEDVFLADESSK

Click here to download the sequence:
Link to NCBI Protein BLAST