Transcript Information: R_Transcript_193308.p1


Annotated TAIR IDAT4G16144.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 3
Annotated Gene Symbol(s)AMSH3
Annotation TypeHomolog
Chromosome Positionchr4:9138053-9141422 | Reverse length=507
E-Value4E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5881064040273
Replicate 21.4101992816917
Replicate 30.85472901478181
Condition 2: 8 Hour
Replicate 10.73092134170881
Replicate 21.5018502729154
Replicate 32.573735834234
Condition 3: 24 Hour
Replicate 12.569903794146
Replicate 21.1521403898063
Replicate 31.9600929570356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_193308.p1 GENE.R_Transcript_193308~~R_Transcript_193308.p1 ORF type:5prime_partial len:134 (-),score=30.75 R_Transcript_193308:52-453(-)
AACAATATAGTGGATTTGTATTTTATGCTTGTCAGATATTCGAGTTTGGTGTCTGAAACAATACCATTTCATCGGGATTATCAGACTCTGCACACCGGAGAAAAGACTTATTACAAAAAGAATTTGCTTGCAGTGTTGGATGAGCTGGAATCTTTGAAGCCTGAGTTCTTGTGTCGAGTGGATCAGCTGAACAAAGCTTATAGAGAAGCACAGCAGAATCAACTTGATGTCCGAGAGACATCGTCAAATGGCTCTGAAACATCTGTGGCCTGGCCTTCTGCTTATGCTCCTAGTTATGAAACTAAGCAGCTGCAACCAGTAAGCAAGAAATTTCAGTCCTCGTGGAGCCAGAGTAATGACTGTCAAGCTGTGCCTTTGGAGCAAAAGTTCTCCAAGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_193308.p1 GENE.R_Transcript_193308~~R_Transcript_193308.p1 ORF type:5prime_partial len:134 (-),score=30.75 R_Transcript_193308:52-453(-)
NNIVDLYFMLVRYSSLVSETIPFHRDYQTLHTGEKTYYKKNLLAVLDELESLKPEFLCRVDQLNKAYREAQQNQLDVRETSSNGSETSVAWPSAYAPSYETKQLQPVSKKFQSSWSQSNDCQAVPLEQKFSKL*

Click here to download the sequence:
Link to NCBI Protein BLAST