Transcript Information: R_Transcript_193386.p1


Annotated TAIR IDAT5G66330.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26500531-26501787 | Reverse length=418
E-Value4E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6936992286829
Replicate 20.24936223772325
Replicate 30.97938545541744
Condition 2: 8 Hour
Replicate 10.29080599699816
Replicate 20.3717961351266
Replicate 30.25869278793901
Condition 3: 24 Hour
Replicate 11.308758606805
Replicate 20.99536797843461
Replicate 31.5077041233255


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_193386.p1 GENE.R_Transcript_193386~~R_Transcript_193386.p1 ORF type:internal len:421 (+),score=37.88,LRR_8|PF13855.2|5.3e+03,LRR_8|PF13855.2|3.4e-06,LRR_8|PF13855.2|2.4e-05,LRR_8|PF13855.2|2.7e-06,LRR_8|PF13855.2|3.4e-05,LRR_4|PF12799.3|7.8e+03,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|0.77,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|9.5,LRR_1|PF00560.29|1.4e+04,LRR_1|PF00560.29|0.6,LRR_1|PF00560.29|86,LRR_1|PF00560.29|61,LRR_1|PF00560.29|47,LRR_1|PF00560.29|5.1e+02,LRR_1|PF00560.29|5.1,LRR_1|PF00560.29|71,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|4e+03,LRR_1|PF00560.29|1.1e+04 R_Transcript_193386:2-1261(+)
CCTTTAAATCAAAGCTACTACCAGTACTCCCACTACTACTTTCCTTTCTCACATTCCCATCTTCATAAATTTGCAAGTCAAGCAATGTGCACTTCCAATTTCTCACTAATTCTCATTTTTTTCTTCTTTTTTACTACTCTGTTCAGCAATGTTGCTTCCAAGACATATTGGAGGGACATACAGGCCCTTAAGCAGCTCAAACTCGAAATCAACCCCGACTCGGTGAGTCCTGGCTCGTGTCTCGGCTCTTGGGACTTCTCCTACGACCCTTGTGACTCTCTTTTCAGTGACAAGTTCACTTGTGGTTTTACTTGTCATCATTCCATTGGCCCCCACAATACTAGCCGACTCACTGAACTCGCTCTTGACCAGGCTGGTTATGCTGGTTCACTTTCTTCTGCTTCTTTCAACCTCCCACTCTTACGCTCCCTCACTCTTTCCGGCAACAACTTCTCTGGTCCCATCCCTGACTCGCTCTCCAAGTTAACTCGCCTTCAACGGCTCATCCTTTCCACCAACTCCTTCTCTGGCCCCATCCCTGACTCACTGGGTCAAATTGGCTCCCTCCAGGAGCTCGCCCTCGATAACAACGCCCTTGCGGGTCCCATCCCTGCTAGCTTTTCTGGGCTGGTCAGCTTGCAACGGCTGGAAATTCAGGGGAATCAACTCAGTGGCGAGTTCCCCGACCTGAGTCAACTCAGTAGAATCAACTTCCTTGATTGCAGTGACAATTCCATCTCCGGCGAGTTCCCGATGAATTTACCGGCTTCATTGGTGGAGATATCGATGAGGGACAACAACTTGGGAGGAAACCTACCTGCTGGTATACAAAAGTTAGGATCTTTACAAGTTTTGGACCTGACTCAGAACCAACTCAGTGGGTCAGTCCCGGTGAGTTTGTTCAGTCACCAGAGTCTCCAGCAACTTTCTCTCTCCGACAATAACCTCAGCTCCATCGAGGTGCCGGGCAATTTGGGCACACAATCCGAGCTGATAGCCATTGACTTGAGTAGCAACCAATTTGGTGGGCTTTTGCCGGGCTTTTTGGGCTTAATGCCAAAACTATCAGCTTTATCCCTTGAGAAGAACAAGTTTACGGGTATGATTCCCATTCAATATGCTTTGAAAACGGTTTTACCCGGATCCGGAATGGCCCCGTTTGAGAGGCTGCTATTGGGTGCAAATTTCTTATTCGGGCCCATACCCGACCCGCTAGTGAGGATGGAGCCTGGTTCGGCCAATGTGAATTTAGTGGATAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_193386.p1 GENE.R_Transcript_193386~~R_Transcript_193386.p1 ORF type:internal len:421 (+),score=37.88,LRR_8|PF13855.2|5.3e+03,LRR_8|PF13855.2|3.4e-06,LRR_8|PF13855.2|2.4e-05,LRR_8|PF13855.2|2.7e-06,LRR_8|PF13855.2|3.4e-05,LRR_4|PF12799.3|7.8e+03,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|0.77,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|9.5,LRR_1|PF00560.29|1.4e+04,LRR_1|PF00560.29|0.6,LRR_1|PF00560.29|86,LRR_1|PF00560.29|61,LRR_1|PF00560.29|47,LRR_1|PF00560.29|5.1e+02,LRR_1|PF00560.29|5.1,LRR_1|PF00560.29|71,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|4e+03,LRR_1|PF00560.29|1.1e+04 R_Transcript_193386:2-1261(+)
PLNQSYYQYSHYYFPFSHSHLHKFASQAMCTSNFSLILIFFFFFTTLFSNVASKTYWRDIQALKQLKLEINPDSVSPGSCLGSWDFSYDPCDSLFSDKFTCGFTCHHSIGPHNTSRLTELALDQAGYAGSLSSASFNLPLLRSLTLSGNNFSGPIPDSLSKLTRLQRLILSTNSFSGPIPDSLGQIGSLQELALDNNALAGPIPASFSGLVSLQRLEIQGNQLSGEFPDLSQLSRINFLDCSDNSISGEFPMNLPASLVEISMRDNNLGGNLPAGIQKLGSLQVLDLTQNQLSGSVPVSLFSHQSLQQLSLSDNNLSSIEVPGNLGTQSELIAIDLSSNQFGGLLPGFLGLMPKLSALSLEKNKFTGMIPIQYALKTVLPGSGMAPFERLLLGANFLFGPIPDPLVRMEPGSANVNLVDN

Click here to download the sequence:
Link to NCBI Protein BLAST