Transcript Information: R_Transcript_193390.p1


Annotated TAIR IDAT5G66330.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26500531-26501787 | Reverse length=418
E-Value5.4E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31201642657639
Replicate 21.0318694649035
Replicate 30.88102836908279
Condition 2: 8 Hour
Replicate 10.62784269095501
Replicate 20.43001695848434
Replicate 30.27149844945023
Condition 3: 24 Hour
Replicate 11.2754337348725
Replicate 22.0264447271257
Replicate 31.3562893929915


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_193390.p1 GENE.R_Transcript_193390~~R_Transcript_193390.p1 ORF type:5prime_partial len:468 (+),score=39.99,LRR_8|PF13855.2|6e+03,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|7.3e-07,LRR_8|PF13855.2|3.5e+03,LRR_8|PF13855.2|3.3e-06,LRR_8|PF13855.2|0.00045,LRR_4|PF12799.3|1e+04,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.45,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|0.087,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|0.53,LRR_4|PF12799.3|2.5,LRR_4|PF12799.3|34 R_Transcript_193390:3-1406(+)
AAAAACCACCAAAAAACAACCAAATTAGAACCACTCTTCCCCCCCCCCCCCGGCTTTAAATCAAAGCTACTACCAGCACTTCCACGACTCCTTTCCTTTCTCACATTCCCATCTCATAAGTTTGCAAGTCAAGCAATGAGCACTTCCAATTCCTCACTTATTTTTTTCTTCTTTTTTACTACTCTGTTCAGCAATGTTGCTTCCAAGACATATTGGAGGGACATACAGGCCCTTAAGCAGCTCAAACTCGAAATCAACCCCGACTCGGTGAGTCCTGGCTCGTGTCTCGGCTCTTGGGACTTCTCCTACGACCCTTGTGACTCTCTTTTCAGTGACAAGTTCACTTGTGGTTTTACTTGTCATCATTCCATTGGCCCCCACAATACTAGCCGACTCACTGAACTCGCTCTTGACCAGGCTGGTTATGCTGGTTCACTTTCTTCTGCTTCTTTCAACCTCCCACTCTTACGCTCCCTCACTCTTTCCGGCAACAACTTCTCTGGTCCCATCCCTGACTCGCTCTCCAAGTTAACTCGCCTTCAACGACTCATCCTTTCCATCAACTCGTTCTCTGGCCCCATCCCTGCCTCACTGGGTCAACTCGGCTCCCTTCAGGAGCTCGCCCTCGATAACAACGCCCTTGCGGGTCCCATCCCTGCTAGCTTTTCTGGGCTGGTCAGCTTGCAACGGCTGGAAATTCAGGGGAATCAACTCGGTGGCGGGTTCCCTGACCTGAGTCAACTCAGTAGAATCAACTTCCTTGATTGCAGTGACAATTCCATCTCCGGCGAGTTCCCGATGAATTTACCGGCTTCATTGGTGGAGATATCGATGAGGGACAACAACTTGGGAGGAAACCTACCTGCTGGTATACAAAAGTTAGGATCTTTACAAGTTTTGGACCTGACTCAGAACCAACTCAGTGGGTCAGTCCCGGTGAGTTTGTTCAGTCACCAGAGTCTCCAGCAACTTTCTCTCTCCGACAATAACCTCAGCTCCATCGAGGTGCCGGGCAATTTGGGCACACAATCCGAGCTGATAGCCATTGACTTGAGTAGCAACCAATTTGGTGGGCTTTTGCCGGGGTTTTTGGGCTTAATGCCAAAATTTTCAGCTTTATCCCTTGAGAATAACAAGTTTACGGGTATGATTCCCATTCAATATGCTTTGAAAACGGTTTTACCCGGATCCGGAATGGCCCCGTTTGAGAGGCTGCTATTGGGTGCAAATTTCTTATTCGGGCCCATACCCGACCCGCTAGTGAGGATGGAACCTGGTTCAGCTAATGTGAATTTAGTGGATAATTGTTTGTTTGTGTGCCCAAACACGCTCTTCTTTTGCCAAGGAGGTGACCAAAAATCATTAGTTGAGTGTAGGAACACAATTGGGCCTATTATTCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_193390.p1 GENE.R_Transcript_193390~~R_Transcript_193390.p1 ORF type:5prime_partial len:468 (+),score=39.99,LRR_8|PF13855.2|6e+03,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|7.3e-07,LRR_8|PF13855.2|3.5e+03,LRR_8|PF13855.2|3.3e-06,LRR_8|PF13855.2|0.00045,LRR_4|PF12799.3|1e+04,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.45,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|0.087,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|0.53,LRR_4|PF12799.3|2.5,LRR_4|PF12799.3|34 R_Transcript_193390:3-1406(+)
KNHQKTTKLEPLFPPPPGFKSKLLPALPRLLSFLTFPSHKFASQAMSTSNSSLIFFFFFTTLFSNVASKTYWRDIQALKQLKLEINPDSVSPGSCLGSWDFSYDPCDSLFSDKFTCGFTCHHSIGPHNTSRLTELALDQAGYAGSLSSASFNLPLLRSLTLSGNNFSGPIPDSLSKLTRLQRLILSINSFSGPIPASLGQLGSLQELALDNNALAGPIPASFSGLVSLQRLEIQGNQLGGGFPDLSQLSRINFLDCSDNSISGEFPMNLPASLVEISMRDNNLGGNLPAGIQKLGSLQVLDLTQNQLSGSVPVSLFSHQSLQQLSLSDNNLSSIEVPGNLGTQSELIAIDLSSNQFGGLLPGFLGLMPKFSALSLENNKFTGMIPIQYALKTVLPGSGMAPFERLLLGANFLFGPIPDPLVRMEPGSANVNLVDNCLFVCPNTLFFCQGGDQKSLVECRNTIGPIIP*

Click here to download the sequence:
Link to NCBI Protein BLAST