Transcript Information: R_Transcript_193479.p3


Annotated TAIR IDAT3G62140.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23007277-23008626 | Forward length=214
E-Value2.5E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.593215378042
Replicate 214.166178594129
Replicate 315.17916346733
Condition 2: 8 Hour
Replicate 18.2602917894321
Replicate 28.8904710934834
Replicate 317.276834204947
Condition 3: 24 Hour
Replicate 116.872605311927
Replicate 213.817752557952
Replicate 313.185364269215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_193479.p3 GENE.R_Transcript_193479~~R_Transcript_193479.p3 ORF type:complete len:83 (-),score=21.28,Nefa_Nip30_N|PF10187.5|9.1e-08 R_Transcript_193479:109-357(-)
ATGGCCGAGGATATTCCTCCTCCCATCAGATTGATGAATTTCGTGTCTCAGGAACAGTTGGATGAAGCAAAGAGAACCAGGGGTGAAAGAGTTGAGGACGGCACTGCTCAGAGAGATCGTCCTCTCTATGAGATTTTGCAGGAGAACAAGGACAAGCGAGATGCTGAGTTCAATGAACGATTCAAGCATCATATGTGTCTTTCTCTGCTCACAATTTATTCGCTCCTTTGTGTGCGAAATCAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_193479.p3 GENE.R_Transcript_193479~~R_Transcript_193479.p3 ORF type:complete len:83 (-),score=21.28,Nefa_Nip30_N|PF10187.5|9.1e-08 R_Transcript_193479:109-357(-)
MAEDIPPPIRLMNFVSQEQLDEAKRTRGERVEDGTAQRDRPLYEILQENKDKRDAEFNERFKHHMCLSLLTIYSLLCVRNQN*

Click here to download the sequence:
Link to NCBI Protein BLAST