Transcript Information: R_Transcript_193683.p1


Annotated TAIR IDAT1G20200.1
Annotated Gene NamePAM domain (PCI/PINT associated module) protein
Annotated Gene Symbol(s)EMB2719, HAP15
Annotation TypeOrtholog
Chromosome Positionchr1:7001409-7004154 | Reverse length=488
E-Value5.9E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.704060824484
Replicate 210.918076216475
Replicate 38.4296794353841
Condition 2: 8 Hour
Replicate 111.165554415944
Replicate 211.806545612146
Replicate 311.326605027122
Condition 3: 24 Hour
Replicate 118.549908239985
Replicate 29.5278718407294
Replicate 313.482826087129


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_193683.p1 GENE.R_Transcript_193683~~R_Transcript_193683.p1 ORF type:internal len:125 (-),score=26.25,Rpn3_C|PF08375.7|3e+03,Rpn3_C|PF08375.7|9.4e-23,PCI|PF01399.23|1.2e-14 R_Transcript_193683:2-373(-)
CGTCTGAGGCACAATGTCATCAGGACCGTATTGAGAAACATCAGCATTTCTTATTCCCGCATCTCACTTACTGACGTTGCCAAGAAGCTGAGATTGGATTCTGCAAACCCTGTTGCTGATGCCGAGAGCGTTGTGGCCAAGGCTATTCGTGATGGTGCAATCGATGCTACATTAGATCATGCAAATGGTTGGATGCTGTCTAAGGAAACTGGTGACATTTACTCAACGACCGAGCCACAGTCTGCCTTTGACTCTAGAATTGCATTCTGTCTTAACATGCACAATGAAGCAGTTCGGGCATTGCAGTATCCGCCGAACTCACACAAGGAGAAAGAAAGTGCTGAGAAGAGGAGGAAAAGACAGCAGCAGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_193683.p1 GENE.R_Transcript_193683~~R_Transcript_193683.p1 ORF type:internal len:125 (-),score=26.25,Rpn3_C|PF08375.7|3e+03,Rpn3_C|PF08375.7|9.4e-23,PCI|PF01399.23|1.2e-14 R_Transcript_193683:2-373(-)
RLRHNVIRTVLRNISISYSRISLTDVAKKLRLDSANPVADAESVVAKAIRDGAIDATLDHANGWMLSKETGDIYSTTEPQSAFDSRIAFCLNMHNEAVRALQYPPNSHKEKESAEKRRKRQQQE

Click here to download the sequence:
Link to NCBI Protein BLAST