Transcript Information: R_Transcript_19370.p1


Annotated TAIR IDAT5G26760.2
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9403869-9407170 | Reverse length=735
E-Value3.8E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.325262838482
Replicate 211.84125558726
Replicate 315.131604730618
Condition 2: 8 Hour
Replicate 111.220024277393
Replicate 212.318919238878
Replicate 313.909915710401
Condition 3: 24 Hour
Replicate 114.505977412805
Replicate 214.569139684898
Replicate 316.687231771734


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19370.p1 GENE.R_Transcript_19370~~R_Transcript_19370.p1 ORF type:complete len:766 (+),score=188.08,RPAP2_Rtr1|PF04181.9|3e-21,RPAP2_Rtr1|PF04181.9|3.9e+03 R_Transcript_19370:212-2509(+)
ATGTCCAAGGAACATATAAAGACTGTGGCAGATGCTGTGCACAAGATACAGCTTGCACTTTTAGATGGTATCCAGGATGAAGGCCATCTATTGGCTGCTGGTGCATTGATGTCTAGGAATGATTATCAAGATATAGTTATGGAACGTACGATTTATGAACTCTGTGGTTATCCCTTGTGCTCGAATGCTCTGCCATCTGAGCGCCCTCGAAAGGGGCACTACAGGATTGCGTTGAAAGAGCACAAGGTGTATGACCTTCATGAGACTTACATGTATTGTTCTTCTAGTTGTTTGATCAATAGCCGGGCGTTTGCTGGTAGCTTGAAGGATCAGAGATGCTCGGTTATGAGCCCCGTGAAGCTTAATGAGATTATGAGTTTTTTTGGAAATGTGGGGGCGGATTTTGAGGACGAGATGGGTAAGAGTGGGGATTTGGGGCTCTCTAAATTGAGGATTCAGGAGAATGCTGAGATCAAAGGAGGGGAAGTGTCTTTGGAGGAGTGGACGGGTCCATCAAATGCGATTGAAGGGTATGTACCCAAGAGGGATCGTAATTCTGAGTTGTCATTGTCAAAAGCTTCAAAGAATGGTTCTGAATCTGGTAGTGCAAAAGTGAGTAAGCATAATGACAATGTTCAAAAGAAGGCGGACTTTGAGGTTGCTTTTACACCGAATAAGGATACAAGTGGCCCTAACAAAGTTCCTGAAGACAAGAAGTTTTCCAGAACCAACCATTCAAGTATATCAAAACCTTTGCTTGATGAGATGGACTTCATGAGTACTATTATAACCAATGATGAATATACTGTTTCTAAGAGGCCAGATGGTGATTCCAAGCCTGTATCTTCTAGTGCAGCCAAAGAAGGATCGAAATCAAAAAGGTCTGACTCGAACAAGGGGAAAACTTCATTTTTTAATGGTGTAGACTTTATGAGTACTATTATTACTGAAGATGAATATAGCATTTCCAAATTGCCTTCCAGTCAAGCAGTATCTGATCCAAACCAGCTTTCAAAAGAATTTGTAGAGAAACTAGTTTTTTCTGATGCTGGAAAACAACTTAAAGCCTCAGAGGAATCCTCTGGTTCCTTAGAGAATGTTCCTCAGAGTTCTGTGGATTCAGCAGTTATGGAAACTGGAGTTATCACAAATGTGAATTCAGACCTAGCCAGATCTTTTGATCACAGTCAAAATGACGCTTACTCAAGTTCTGTACATGTGAAAGATGAGTGCTGTACTGAGCAAGCTGTTCAATCAAGTAAAGGCACAGTCAAATCTTCTATGAAAAGTTCTAGGCAAAGAAAGGAAGCCCGTTCTGTTACTTGGGCTGATGAGAAAAACAATGGTCTTGATGGTGGAACGCTTTGTAATATCAGAGAATTCAGTAATATGGAAGAAGGCCCCAGCACCTCTAGAGATTCCAACAATATGAAAGAAGCTCCCTGGACCTCAAGTAGCAAAGAGGCAGGGGATCATGATGACTCCGAACGTTTTGCTTCAGCTGAAGCATGTGCCATGGCGATGACCCAGGCAGCAGAAGTTGTTGCATCTGGACAGTCTGATGCAACTGATGCTGTTTCTGTGGCTGGGATCATTGTGCTACCGAATCTTCAACAACCAGATGAGGGGGAGGATCCTATGGATGACGATTCAGTGGAGAAGGACACAACTTCTAGAAAGTGGCCTAAGAAGCCAGACAACTCAAATTCTGACTTATTTGATTCGGATGACTCATGGTTTGATGCCGCCCCAGAGGGGTTCAGCTTGACTTTATCACCTTTTGCGACAATGTGGAATGCCCTGTTCTCTTGGGTGGCATCATCCTCGCTGGCTTATATCTATGGAAGAGATGAGAGTTCCCATGAAGAGTATTTGTTTGTCAATGGAAGAGAATACCCTGGCAAAGTTATGCTTCCTGATGGCCGTTCATCAGAAATCAAGCAAACTCTAGCTGGCTGTTTAGCCCGAGCTTTGCCTGGAGTGATTGCTGTTCTCAAATTGCCAACACCAATATCTACTCTGGAGCAAGGACTGGCCTGTTTGCTGGACACTATGTCTTTTATGGATCCACTTCCACCATTTAGGTTAAAGCAGTGGCAAGTGATTATTCTTTTGCTCATTGATGCTCTATCAATCTGTAGAATTCCTGGACTGGCTCCATACCTGACAAGCAGGAGGATCTTGATTCCCAAGGTGCTGGATGGTGCTCAGTTAAGTGCAGAAGAGTACGAGATTATGAGAGATCTCGTGATTCCACTGGGCCGGGTGCCTCAGTTCACGATGCAGAGTGGTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19370.p1 GENE.R_Transcript_19370~~R_Transcript_19370.p1 ORF type:complete len:766 (+),score=188.08,RPAP2_Rtr1|PF04181.9|3e-21,RPAP2_Rtr1|PF04181.9|3.9e+03 R_Transcript_19370:212-2509(+)
MSKEHIKTVADAVHKIQLALLDGIQDEGHLLAAGALMSRNDYQDIVMERTIYELCGYPLCSNALPSERPRKGHYRIALKEHKVYDLHETYMYCSSSCLINSRAFAGSLKDQRCSVMSPVKLNEIMSFFGNVGADFEDEMGKSGDLGLSKLRIQENAEIKGGEVSLEEWTGPSNAIEGYVPKRDRNSELSLSKASKNGSESGSAKVSKHNDNVQKKADFEVAFTPNKDTSGPNKVPEDKKFSRTNHSSISKPLLDEMDFMSTIITNDEYTVSKRPDGDSKPVSSSAAKEGSKSKRSDSNKGKTSFFNGVDFMSTIITEDEYSISKLPSSQAVSDPNQLSKEFVEKLVFSDAGKQLKASEESSGSLENVPQSSVDSAVMETGVITNVNSDLARSFDHSQNDAYSSSVHVKDECCTEQAVQSSKGTVKSSMKSSRQRKEARSVTWADEKNNGLDGGTLCNIREFSNMEEGPSTSRDSNNMKEAPWTSSSKEAGDHDDSERFASAEACAMAMTQAAEVVASGQSDATDAVSVAGIIVLPNLQQPDEGEDPMDDDSVEKDTTSRKWPKKPDNSNSDLFDSDDSWFDAAPEGFSLTLSPFATMWNALFSWVASSSLAYIYGRDESSHEEYLFVNGREYPGKVMLPDGRSSEIKQTLAGCLARALPGVIAVLKLPTPISTLEQGLACLLDTMSFMDPLPPFRLKQWQVIILLLIDALSICRIPGLAPYLTSRRILIPKVLDGAQLSAEEYEIMRDLVIPLGRVPQFTMQSGG*

Click here to download the sequence:
Link to NCBI Protein BLAST