Transcript Information: R_Transcript_193740.p2


Annotated TAIR IDAT5G28950.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10992505-10993435 | Forward length=148
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.15668880907685
Replicate 30.17094580295636
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.27091956149831
Condition 3: 24 Hour
Replicate 10
Replicate 20.49377445277412
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_193740.p2 GENE.R_Transcript_193740~~R_Transcript_193740.p2 ORF type:3prime_partial len:134 (+),score=15.42,DDE_Tnp_4|PF13359.2|9.2e-11 R_Transcript_193740:637-1035(+)
ATGAATTGCATTGGTGCTATTGACGGAACTCATGTAGCAGCATGGGCACCGGCATGTAAACAAAGGTCATTTCGTGGTAGAAAAGCAGTACTTGTGACTCAATATGTCATGGCGGTTTGTTCACATGATATGATGTTCACTTTTGTTTATATTGGTTGGGAAGGAACTACTAATGATTCTTGTGTCTTTGCTGACGCCGTATTTAGAAGTGAAAATAAATTTCCTGTTCCTACAGGGGGTATGACTTTTTCTTATTATTTCTACGTGGTTGATAGTTGTTACCTTAATGTAAAAGGGTTTTTATCTCCTTCTCGTGGTGAGCGATATCATCGTAGTGGCTTTCTACGTGGTGGAGGAATGAGTGGAAAAGAAGAAATGTTCAATTATACACACTCTTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_193740.p2 GENE.R_Transcript_193740~~R_Transcript_193740.p2 ORF type:3prime_partial len:134 (+),score=15.42,DDE_Tnp_4|PF13359.2|9.2e-11 R_Transcript_193740:637-1035(+)
MNCIGAIDGTHVAAWAPACKQRSFRGRKAVLVTQYVMAVCSHDMMFTFVYIGWEGTTNDSCVFADAVFRSENKFPVPTGGMTFSYYFYVVDSCYLNVKGFLSPSRGERYHRSGFLRGGGMSGKEEMFNYTHSS

Click here to download the sequence:
Link to NCBI Protein BLAST