Transcript Information: R_Transcript_194048.p1


Annotated TAIR IDAT3G53540.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in 206 species: Archae - 2; Bacteria - 409; Metazoa - 304; Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19846805-19850670 | Reverse length=924
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4767544675655
Replicate 21.9996476586951
Replicate 32.5451930662392
Condition 2: 8 Hour
Replicate 11.9433226148607
Replicate 23.9042809563975
Replicate 33.4574496419785
Condition 3: 24 Hour
Replicate 14.9195301202223
Replicate 22.8006677956289
Replicate 34.1690866070281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_194048.p1 GENE.R_Transcript_194048~~R_Transcript_194048.p1 ORF type:internal len:126 (-),score=27.58,DUF4378|PF14309.2|3.1e-18 R_Transcript_194048:1-375(-)
CTTGGAGTTGGGGAGATCTGGGAATCATCTTACTTGGTAGATGTACTGGCTAAAGCAGGAATTGACGAAACAAAACCTGATTTGTTCCTTGGGACATGGCACTCTCCAGAATGTCCTGTTGCCCCTTGGGTGTTCGAAATTCTTGAGAAGAAATATCTTTCATGGGAATCATGTTTGACGTCAGAGAGAAAGCTGCTGTTTGATAGTATAAATTCTGCCATCGTAGAAATTTCCAGGAATTTTGTAGATCTGCATTGGTGGATGAAGCCACTTCCAATTGCTGGGAGGCCTCAATGGCGGAAGGATTTGTGGCTCAAAACTGAGCTGCAGAATTCACTGAAGAAACATGAAACGAAAGTGACCAATATTGGGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_194048.p1 GENE.R_Transcript_194048~~R_Transcript_194048.p1 ORF type:internal len:126 (-),score=27.58,DUF4378|PF14309.2|3.1e-18 R_Transcript_194048:1-375(-)
LGVGEIWESSYLVDVLAKAGIDETKPDLFLGTWHSPECPVAPWVFEILEKKYLSWESCLTSERKLLFDSINSAIVEISRNFVDLHWWMKPLPIAGRPQWRKDLWLKTELQNSLKKHETKVTNIGM

Click here to download the sequence:
Link to NCBI Protein BLAST