Transcript Information: R_Transcript_194274.p1


Annotated TAIR IDATMG00310.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)ORF154
Annotation TypeHomolog
Chromosome PositionchrM:90883-91347 | Reverse length=154
E-Value6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39156516899562
Replicate 20.41576832507521
Replicate 30.75599794046708
Condition 2: 8 Hour
Replicate 10.56568004828619
Replicate 20.59038631923922
Replicate 30.56910990393953
Condition 3: 24 Hour
Replicate 10.75768340685492
Replicate 20.14557926660447
Replicate 30.65012984218507


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_194274.p1 GENE.R_Transcript_194274~~R_Transcript_194274.p1 ORF type:complete len:606 (+),score=81.97,RVT_1|PF00078.23|8.7e-41 R_Transcript_194274:467-2284(+)
ATGGACAGGTGCAAGAAGGCCTTGACAGATTGGAATAAAGAAGTTTTTGGGCATGTGCAAAGTAAAATCAAGATGAAGAGAAGGGAACTTAATCATGCGGGGGATATTGAAGACCGTAAGAGGATCATGGTGGAGTTAAGGGATTTAACTAGAAAGGAGGAAGTACTTTGGTGGCAAAGATCAAGGGTCGATTTTCTCAAGTATGGAGATTCAAATACAACTTGGTTTCATGAGAAGGCAAACGCACGGCGGAAGCGCAATTTCATTAACAAGCTTTCGGATTTAAGGGGAACTATGGTTGAAGATGTTCAGGAGTTTCCAAGAGTGGTCAATGAGTATTTTGGCAATCTTTTTACTTCGGCAGGACCAAGAAATATTGACAGAGTGTTGCAGTGTGTTCAGCCTAGAGTCACGGAGGAGATGAATGAGTCCCTTTGTAAGCCCTATACTTCGGAGGAAATCTTTGCGGCACTCCAGCAGATGCACCCTAGCAAGGCCCCAGGGCCAGATGGTATGAACGCCTTTTTCTTTCAAAAATATTGGTCTATAGTTGGCCCTTCTGTTTGTGATCTCGTTATGTGTATCTTGAATGGTCGGGATTTTCCTACTGAGATTAATCATACACATGTATGCCTTATTCCCAAAAAACACAAACCCTTGGCCCTAGCTGATTTTAGGCCTATAAGCCTTTGTAATGTTATCATTAAATTAGCCTCAAAGGTAATTGTGAATAGGTTGAAACCTTTTCTTCCCTCTATTGTCTCGGAGTCTCAAATTGCATTCACCCCTCGGAGACTAATAAGTGATAACATTGTGATTGCTTTTGAAGTCTTTCATGCTATGCACTGCAATGTTAACAAAAAAGGGAGTATGGCTCTTAAATTGGACATGAGCAAGGCTTATGATAGAGTTGAGTGGACCTTTTTGGAGGAGATTATGCTTAAAATCGAGTTTCGAGAGTCTTGGGTGCAGATGGTTATGAAGTGTGTCAAAACGGTTTCCTATTCTTTCATTATTAATAGGGAACCGTGTGGTCTAGTTCATCCAACTAGGGGGCTCAGACAAGGGGATCCCCTTTCCCCATACCTCTTTCTTTTCTGTGCTGAAGGTCTCTCGGGTTTACTTTCTCATGCTGTTGATACTAATGACTTTCAAGGTGTGTGTGTGGCCCCAGGTGCTCCATCTATATCCCACCTTCTTTTTGCAGATGACTCCATCATATTTTCCAAAGCTGATGAGGCCCACGCCGTGAAGATTGGCACAATTTTGCAGTGGTATGAGGAAGCTTCAGGTCAGCAAATTAATAGAGACAAAACTACGGTGTCCTTCAGTAAGGGTGTCCTGACAATGACAAGAGAACATCTAAGCGACCTTCTTGGAGTTCAAGTGGTTTCAAGTCAAGACAAGTATCTTGGACTACCCACCTTCATTGGTAGATCAAGGAAGAAAGCATTCATGCCCATCAAGGATAGGATTCAAAGGAAGTTACAGGTTTGGATGAACAAGTATCTATCATGGTCAGGTAAGGAAGTATTAATTAAGGCGGTTGCCCAAGCTATTCCTTCCTATGCCATGAGTGTGTTCAAACTACCTAGGGACTTCGTTGATGAGATTAATGGTTTGATCCGGAAATTTTGGTGGGGACATAAAGACAGGAAACGGAAGATACACTGGGTAAAGTGGAATTCTCTTTGTCGCTCTAAGGATGATGGTGGACTTGGATTTCGGGATTTGGGTGCTTTCAATGACGCTCTCTTGGCAAAGCAACTATGGCGCCTTCTAACATCTCCCAACTCTCTGTATGACCGCATTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_194274.p1 GENE.R_Transcript_194274~~R_Transcript_194274.p1 ORF type:complete len:606 (+),score=81.97,RVT_1|PF00078.23|8.7e-41 R_Transcript_194274:467-2284(+)
MDRCKKALTDWNKEVFGHVQSKIKMKRRELNHAGDIEDRKRIMVELRDLTRKEEVLWWQRSRVDFLKYGDSNTTWFHEKANARRKRNFINKLSDLRGTMVEDVQEFPRVVNEYFGNLFTSAGPRNIDRVLQCVQPRVTEEMNESLCKPYTSEEIFAALQQMHPSKAPGPDGMNAFFFQKYWSIVGPSVCDLVMCILNGRDFPTEINHTHVCLIPKKHKPLALADFRPISLCNVIIKLASKVIVNRLKPFLPSIVSESQIAFTPRRLISDNIVIAFEVFHAMHCNVNKKGSMALKLDMSKAYDRVEWTFLEEIMLKIEFRESWVQMVMKCVKTVSYSFIINREPCGLVHPTRGLRQGDPLSPYLFLFCAEGLSGLLSHAVDTNDFQGVCVAPGAPSISHLLFADDSIIFSKADEAHAVKIGTILQWYEEASGQQINRDKTTVSFSKGVLTMTREHLSDLLGVQVVSSQDKYLGLPTFIGRSRKKAFMPIKDRIQRKLQVWMNKYLSWSGKEVLIKAVAQAIPSYAMSVFKLPRDFVDEINGLIRKFWWGHKDRKRKIHWVKWNSLCRSKDDGGLGFRDLGAFNDALLAKQLWRLLTSPNSLYDRIL*

Click here to download the sequence:
Link to NCBI Protein BLAST