Transcript Information: R_Transcript_194510.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value7E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5834279757216
Replicate 20.67111462517848
Replicate 31.8827455558482
Condition 2: 8 Hour
Replicate 11.341691229986
Replicate 21.0210448329308
Replicate 31.1603769346366
Condition 3: 24 Hour
Replicate 10.31449050996855
Replicate 20.40283577882333
Replicate 31.1993262842135


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_194510.p1 GENE.R_Transcript_194510~~R_Transcript_194510.p1 ORF type:complete len:219 (+),score=28.16,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.4e-13,zf-RVT|PF13966.2|4.4e+03 R_Transcript_194510:1266-1922(+)
ATGAAACAGATTGAAACACTTGCTTGCATGTGTAAATGGATTTGGATGATGCATAAGGGTGGTGCTACATTGTGGCAGACATGGTCCAGTAAGTATTTCTGTGCTCAATTTGATATTTGGCATGTGCAACATAAACAAATTCATTCATGGGTTTGGAAGAAAATCATTCAGACAAGGGATAGATTGGTGGAGCACTGTGGACATATAGATGCTGCAGTCAGGACTCTGGAGTCTTGGTGTAATGGAGAGAAGATGAAAATCTCCAAACCTTATGCGTCTTTCAGGACAAAACAACCTAAGATCACATGGAATAAGGTGATCTGGAGTACAAACAATGTTCCTCGTCACCCATTCATTGCTTGGCTAGCAATCCAGGGCAGGCTGTTGACAAAAGTGAAGTTACATAGCAGAGGCCTTGTGCAGGATCATACTTGCTCCCTTCGTAATTCTGCTGCAGAAGATGAAAGTCATTTGTTATCTAACTTCCTGTACTCTAAGCTGGTATGGATAGGTGTTTGCAGATGGTTGGGTATTATTGGGGTGGTGCAAACTTTAAAGTCCGCTTGTAGATGCATTACTCAGCAGAGAAGGGAGCGGCTCAGTAATGAAGATCATTTGTGCTGCCGTGCTGGCTACCGTCTATCACATATGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_194510.p1 GENE.R_Transcript_194510~~R_Transcript_194510.p1 ORF type:complete len:219 (+),score=28.16,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.4e-13,zf-RVT|PF13966.2|4.4e+03 R_Transcript_194510:1266-1922(+)
MKQIETLACMCKWIWMMHKGGATLWQTWSSKYFCAQFDIWHVQHKQIHSWVWKKIIQTRDRLVEHCGHIDAAVRTLESWCNGEKMKISKPYASFRTKQPKITWNKVIWSTNNVPRHPFIAWLAIQGRLLTKVKLHSRGLVQDHTCSLRNSAAEDESHLLSNFLYSKLVWIGVCRWLGIIGVVQTLKSACRCITQQRRERLSNEDHLCCRAGYRLSHMD*

Click here to download the sequence:
Link to NCBI Protein BLAST