Transcript Information: R_Transcript_1946.p1


Annotated TAIR IDAT1G78570.1
Annotated Gene Namerhamnose biosynthesis 1
Annotated Gene Symbol(s)RHM1, ROL1, ATRHM1
Annotation TypeOrtholog
Chromosome Positionchr1:29550110-29552207 | Forward length=669
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3305107212896
Replicate 22.3845355930014
Replicate 32.1285021660142
Condition 2: 8 Hour
Replicate 11.0473305065931
Replicate 21.3851873706929
Replicate 31.3386143525359
Condition 3: 24 Hour
Replicate 14.4696615841548
Replicate 21.1060159325658
Replicate 32.8408820242581


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1946.p1 GENE.R_Transcript_1946~~R_Transcript_1946.p1 ORF type:complete len:678 (+),score=112.02,GDP_Man_Dehyd|PF16363.1|6.5e-71,GDP_Man_Dehyd|PF16363.1|0.0007,Epimerase|PF01370.17|1.9e-54,Epimerase|PF01370.17|1.3e-10,RmlD_sub_bind|PF04321.13|2.7e-14,RmlD_sub_bind|PF04321.13|5.6e-12,Polysacc_synt_2|PF02719.11|1.6e-19,Polysacc_synt_2|PF02719.11|0.00033,3Beta_HSD|PF01073.15|6.7e-23,3Beta_HSD|PF01073.15|1.4,NAD_binding_4|PF07993.8|1.2e-18,NAD_binding_4|PF07993.8|1.1 R_Transcript_1946:97-2130(+)
ATGGCGAACAATTACAGGCCGAAGAACATCCTGATAACAGGAGCAGCAGGTTTCATAGCCTCCCATGTTGCCAACAGACTTGTCAGAAACAATCCTGACTACAAGATTGTGGTCCTGGACAAGCTCGACTACTGCTCGAACCTCAAAAACTTGAACCCCTCTCGATTCTCCCCCAACTTCAAGTTCATCAAGGGTGACATTGGAAGTGCTGATTTGGTGACTTACATCCTGAGAACAGAAGCCATTGACACCATCATGCACTTTGCTGCACAGACTCATGTTGACAACTCCTTTGGCAACAGCTTCGAGTTCACTAAGAACAACATTTATGGGACCCACGTCCTCCTTGAGGCGTGCAAGGGGATGGCCCCACAGATCAAGAGGTTTGTCCATGTCAGCACTGACGAGGTCTATGGAGAGACCGAAGTGGAGGCTATGGTGGGCAATCATGAGGCGTCTCAGCTCCTTCCTACCAACCCTTACTCTGCCAGCAAAGCAGGGGCCGAAATGCTCGTCATGGCATATGGTAGGTCATACGGGCTTCCAGTTATAACGACAAGGGGGAACAACGTGTATGGGCCTAACCAATTTCCTGAGAAGCTGATTCCCAAGTTCATACTCCTAGCCATGAGAGGGATGCCTCTTCCGATCCATGGGGATGGATCGAATGTGAGGAGTTACTTGTATTGTGAGGATGTGGCTGAGGCATTTGAGATTATCCTCCACAAAGGAGAAGTTGGGCATGTCTACAACATTGGAACCGAGAAGGAGAGGAAGGTCCTTGATGTGGCTAAAAACATTTGCTCCATGTTTTCAAGGAACCCAGATCAAGTTATCGAGTTTGTTGAAAATAGACCTTTCAATGATCAAAGATACTTCTTAGATAACCAGAAGCTCAAGGAAATAGGCTGGTCTGAGAGAACTAGTTGGGAAGAGGGTCTGAGAAAAACCAAGGAATGGTACGTCAGAAATCCTGATTGGTGGGGAGATGTATCAGGAGCCTTAGTCCCTCACCCTAGGATGCTAATGATGCCCGATGATACAAATCTACGTGTCAATGGAAACGAATCCCATGAGCCTCTTAGCAACCACAACGACAACACAAACCCAGTTCATATGGTGGTGGTACAAACCTCGAAAATTGATGCACCTACCGAGAGCCCTTCATTGAAGTTCCTGATCTATGGTAAAACAGGGTGGATCGGAGGTCTTCTTGGAAAACTCTGCGAAAAGCAGGGCATACCATACGAGTATGGAAGAGGGCGAATAGAGGACAGACGCCAAATCTTCGCTGACATACAAAGTGTTCAGCCGACCCATGTCTTCAATGCCGCTGGTGTGACTGGGAGGCCTAATGTGGATTGGTGTGAATCACATATGACAGAAACAATTTGGACTAATGTTCTTGGGACTTTAACGTTGGCTGGTGTTTGTAGAGAACATAGGGTTTTGTTGGTGAACTATGCGACAGGGTGCATTTTCGAGTACGATGATGCCCACCCCATTGGCTCTGGCATTGGGTTCAATGAGGAAGACGAGCCCAACTTTAATGGCTCTTTCTATTCAAAAACCAAAGCCATGGTTGAAGAGCTCTTGAAGGAGTACGAAAACGTTTGCACCTTGAGACTACGGATGCCAATATCATCAGACCTCGGCAACCATAGAAATTTCGTCAACAAAATAACAAGTTACAACAAGGTGGTGAATGTTCCGAATAGCATGACCATTTTAGATGAGCTCTTGCCCATCTCGATTGAGATGGCAAAGAGAAACTTGACGGGCATATGGAACTTCACAAACCCAGGAGTTGTGAGCCACAATGAGATACTAGAGATGTACAAGAAGTACATAGACCCTGACTTCAAATGGGTCAACTTCACTTTGGAGGAGCAACCAAAGGTCATTGTTGCCCCTCGGAGCAACAATGAGCTTGATGCTACGAAGCTGAAGAACGAGTTCCCAGATATTTTGCCAATCAAGGAGTCCCTTATCAAGTATGTGTTTGAACCCAACAAGAGGACTTCAGAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1946.p1 GENE.R_Transcript_1946~~R_Transcript_1946.p1 ORF type:complete len:678 (+),score=112.02,GDP_Man_Dehyd|PF16363.1|6.5e-71,GDP_Man_Dehyd|PF16363.1|0.0007,Epimerase|PF01370.17|1.9e-54,Epimerase|PF01370.17|1.3e-10,RmlD_sub_bind|PF04321.13|2.7e-14,RmlD_sub_bind|PF04321.13|5.6e-12,Polysacc_synt_2|PF02719.11|1.6e-19,Polysacc_synt_2|PF02719.11|0.00033,3Beta_HSD|PF01073.15|6.7e-23,3Beta_HSD|PF01073.15|1.4,NAD_binding_4|PF07993.8|1.2e-18,NAD_binding_4|PF07993.8|1.1 R_Transcript_1946:97-2130(+)
MANNYRPKNILITGAAGFIASHVANRLVRNNPDYKIVVLDKLDYCSNLKNLNPSRFSPNFKFIKGDIGSADLVTYILRTEAIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKGMAPQIKRFVHVSTDEVYGETEVEAMVGNHEASQLLPTNPYSASKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGMPLPIHGDGSNVRSYLYCEDVAEAFEIILHKGEVGHVYNIGTEKERKVLDVAKNICSMFSRNPDQVIEFVENRPFNDQRYFLDNQKLKEIGWSERTSWEEGLRKTKEWYVRNPDWWGDVSGALVPHPRMLMMPDDTNLRVNGNESHEPLSNHNDNTNPVHMVVVQTSKIDAPTESPSLKFLIYGKTGWIGGLLGKLCEKQGIPYEYGRGRIEDRRQIFADIQSVQPTHVFNAAGVTGRPNVDWCESHMTETIWTNVLGTLTLAGVCREHRVLLVNYATGCIFEYDDAHPIGSGIGFNEEDEPNFNGSFYSKTKAMVEELLKEYENVCTLRLRMPISSDLGNHRNFVNKITSYNKVVNVPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKKYIDPDFKWVNFTLEEQPKVIVAPRSNNELDATKLKNEFPDILPIKESLIKYVFEPNKRTSEV*

Click here to download the sequence:
Link to NCBI Protein BLAST