Transcript Information: R_Transcript_194898.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78789759516772
Replicate 20.60421008392225
Replicate 31.3183733868289
Condition 2: 8 Hour
Replicate 10.70462920711497
Replicate 20.64347861413484
Replicate 31.3058712676537
Condition 3: 24 Hour
Replicate 11.6516408077485
Replicate 20
Replicate 30.31493100268917


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_194898.p1 GENE.R_Transcript_194898~~R_Transcript_194898.p1 ORF type:5prime_partial len:139 (-),score=14.68,RVT_1|PF00078.23|2.7e-25 R_Transcript_194898:325-741(-)
GAAATCATCCACTCCATGGAGAAAAGGAAAGGGAAAAGGGGATTCTTCGCACTCAAGATTGACCTAGAGAAGGCATATGACCGGATGGAATGGGATTTCATTCGTAATATGTTATTCTCTTTCAACTTCGATCCTCACTCCATTAGACTCATCATGCAATGCATCACCACTGTCTCCACTTCTGTCCTAGTCAATGGGAGTCAAACGGAGGAATTCCAACCCTCTAGGGGACTTCAGCAAGGGGATCCCCTTTCACCCTACATCTTTATCCAGTGCATAGAATTTCTTTCCAAGATGATTCATGATGCATGTGATGATGGTTCTTGGACCCCCTTCTACTTTAGGAAATCGGGCATGGGAATTTCCCACCTTCTCTTTGCGGACGATGTCCTTCTCTTTGGGGAAGCCAATCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_194898.p1 GENE.R_Transcript_194898~~R_Transcript_194898.p1 ORF type:5prime_partial len:139 (-),score=14.68,RVT_1|PF00078.23|2.7e-25 R_Transcript_194898:325-741(-)
EIIHSMEKRKGKRGFFALKIDLEKAYDRMEWDFIRNMLFSFNFDPHSIRLIMQCITTVSTSVLVNGSQTEEFQPSRGLQQGDPLSPYIFIQCIEFLSKMIHDACDDGSWTPFYFRKSGMGISHLLFADDVLLFGEANP*

Click here to download the sequence:
Link to NCBI Protein BLAST