Transcript Information: R_Transcript_195032.p1


Annotated TAIR IDAT3G47840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17651912-17654032 | Forward length=706
E-Value1.6E-269
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69244920162059
Replicate 20.28674765363685
Replicate 30.41711813528654
Condition 2: 8 Hour
Replicate 10.52018529478214
Replicate 20.61076763754376
Replicate 30.63351600040804
Condition 3: 24 Hour
Replicate 10.97544552712552
Replicate 21.0709685652481
Replicate 31.0296188851196


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_195032.p1 GENE.R_Transcript_195032~~R_Transcript_195032.p1 ORF type:5prime_partial len:659 (+),score=132.75,PPR|PF01535.16|0.063,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|0.00074,PPR|PF01535.16|0.004,PPR|PF01535.16|2,PPR|PF01535.16|0.00034,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|4.8,PPR|PF01535.16|0.017,PPR|PF01535.16|11,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|14,PPR|PF01535.16|0.014,PPR|PF01535.16|8.3,PPR|PF01535.16|0.38,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|0.0094,PPR_2|PF13041.2|3.4e-07,PPR_2|PF13041.2|2.9e+03,PPR_2|PF13041.2|6.3e-10,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|5.1e+02,PPR_2|PF13041.2|1.5e-12,PPR_2|PF13041.2|5.3e+02,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|3.2e+03,PPR_2|PF13041.2|1.7e+02,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|6.2e+02,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|1e+02,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|17,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|62,PPR_1|PF12854.3|6.1,PPR_1|PF12854.3|5.9e-06,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.011,TPR_14|PF13428.2|1.4e+02,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.4e+04,TPR_14|PF13428.2|6.3e+03,TPR_14|PF13428.2|22,TPR_14|PF13428.2|8.4e+03,TPR_14|PF13428.2|1.5,TPR_10|PF13374.2|3.6e+03,TPR_10|PF13374.2|49,TPR_10|PF13374.2|1.6e+03,TPR_10|PF13374.2|9.7e+02,TPR_10|PF13374.2|6.8e+02,TPR_10|PF13374.2|0.0042,TPR_19|PF14559.2|22,TPR_19|PF14559.2|10,TPR_19|PF14559.2|6.3e+02,TPR_19|PF14559.2|1e+02,TPR_19|PF14559.2|14,TPR_12|PF13424.2|7e+03,TPR_12|PF13424.2|33,TPR_12|PF13424.2|4.8e+03,TPR_12|PF13424.2|1.8e+02,TPR_12|PF13424.2|4.2e+03,TPR_12|PF13424.2|0.017,TPR_16|PF13432.2|55,TPR_16|PF13432.2|5.4e+02,TPR_16|PF13432.2|1.3e+02,TPR_16|PF13432.2|4.5e+03,TPR_16|PF13432.2|2.3 R_Transcript_195032:1-1977(+)
GCTAATTCCCAGATCAAGGAGTTAGTAAAAGCTGGTAACTTGAAAGATGCACGCCAACTGTTCGATGAAATGCCGCAAAGAGATGAGGTTTCCTGGACCAACCTGATTACTGGGTATGTGGCTGCCTCGGACTATGATGAGGCTTTAAATTTGTTTTCCAGGATGTGGGTTGACCCTTGTATCAGAATGGACCCCTTTGCCCTCAGTGTAGCTCTGAAAGCCTGTGGGCTTAATAACAGTGTAAATTTTGGACAGTTGTTGCATGGGGTTTGTTTGAAGAATGGACTGGTTAACTCTGTTTTTGTGGGAAGTGCTCTCTTGGATATGTATGCTAAAACAGGTAAGATTTCGGAGAGTTGTCGGGTTTTTGATGAAATGCCAGAGAGGAATGTAGTTTCATGGACTGCCATTATAACAGGACTGGTTAAGGGTGGTTACTGTAAGGAGGGATTGATGTATTTCTCTGACATGTGGTTTGCCCGTTTACCTTGTGATGCATATAGTTTCGCCATTGCGTTGAAGGCTTGTTCTGACTTGTGTGATCTGGTACATGGCATGGAGATTCATACACAAGCAATAAAGAGGGGTTTTGATGCAACCTCTTATGTAGCAAACACTCTTGCTACCATGTACAATAAATGTGGCAAGTTGGATTATGGGATGTGCTTGTTTGGAAGAATGAGGATACCAGATGTGGTTTCATGGACCTCCCTTATTACATCCTATGTTCAGATGGGTATGGGAGACATCGCTGTTCAGCAGTTTTTACGAATGCGAAGCTCAGATGTGAGGCCTAATGAATACACATTTGCAGCTGTTCTTTCTGCTTGTGCCAATCATGGTAAAATCCTATGGGGCAAACAGTTACATGGTCATGTCACGAGGATTGGCTTCGTGGATGCTTTATCTGTAGCAAATTCAGTTGTGGCACTGTATTCAAGATGTGGGCAATTGAAATTGGCATCTGTTGCTTTCAGTGCAATGACTAGGAGAGATATTGTTTCATGGAGCACCATAATGGCAGGTTATTCGCAAGCTGGATTTGGTAAAGAAACCTTTGAGTATTTCTCATGGATGAGGAGGGAAGGACCAAAACCTACTGAGTTTGCACTTGCTAGTGTGTTAAGTGTTTCTGGAGCTATGGCCATTCTTGAGCAGGGAAGGCAGGTACATGCCCATGCTCTGAAAGTTGGATTGGAACATACCTCACTGGTACAAAGTGCTTTGATCACTATGTATTCCAAATGTGGAAGCATAAAACATGCTTCAGATGTGTACAGTTGCACGGGAAATGATGACGTTGTTTGTTGGACTTCCATGATTAATGGATATGCTGAACATGGCCATAGTCAAGAAGCTATAGATTTGTTTGACAGGATGTTGCAAGTTGGTATGAGACCTGATTCCGTGACTTTCATTGGGGTTCTTTCTGCTTGTAGTCATGCAGGACTTGTTGATTTGGGTTATTACTACTTCAATTTTATGAGTAAGAAGTTCCAGATTAATCCTTGTAAAGAGCATTATGGCTGCATGACTGATCTCTTATGTAGGGCTGGAAGGTTAACAGAAGCTGAGAGCATGATAGATAGCATGCCCTGTGGACAGGATGATGTTGTATGGTCAACCTTGCTCAGAGCATGCAGAGTTCACGGTGATGTTGAGCGTGGGAAGCGTGCTGCTGAGATGATTCTTGAACACAATCCCAACTGTGCTGGAACACTTACTAACCTTGCTAACATATACTCTTTGAAAGGGAAGTGGAGGGAGGCAGCAAACATCAGAAAGATGATGAAATCAAAACAGGTGATAAAAGAGCCTGGATCATCTTGGATCAAGGTCAAGGATGATGTTTCGACCTTTGTTTCAGGGGATAAATCACATCCGGATAGAGTTCAAGTCTACAGTGTCCTGCACTTGCTTACATCAGTGATAGATATGTCTGTTCAGGATGTTGATACCCTTCTGCATGATGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_195032.p1 GENE.R_Transcript_195032~~R_Transcript_195032.p1 ORF type:5prime_partial len:659 (+),score=132.75,PPR|PF01535.16|0.063,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|0.00074,PPR|PF01535.16|0.004,PPR|PF01535.16|2,PPR|PF01535.16|0.00034,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|4.8,PPR|PF01535.16|0.017,PPR|PF01535.16|11,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|14,PPR|PF01535.16|0.014,PPR|PF01535.16|8.3,PPR|PF01535.16|0.38,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|0.0094,PPR_2|PF13041.2|3.4e-07,PPR_2|PF13041.2|2.9e+03,PPR_2|PF13041.2|6.3e-10,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|5.1e+02,PPR_2|PF13041.2|1.5e-12,PPR_2|PF13041.2|5.3e+02,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|3.2e+03,PPR_2|PF13041.2|1.7e+02,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|6.2e+02,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|1e+02,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|17,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|62,PPR_1|PF12854.3|6.1,PPR_1|PF12854.3|5.9e-06,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.011,TPR_14|PF13428.2|1.4e+02,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.4e+04,TPR_14|PF13428.2|6.3e+03,TPR_14|PF13428.2|22,TPR_14|PF13428.2|8.4e+03,TPR_14|PF13428.2|1.5,TPR_10|PF13374.2|3.6e+03,TPR_10|PF13374.2|49,TPR_10|PF13374.2|1.6e+03,TPR_10|PF13374.2|9.7e+02,TPR_10|PF13374.2|6.8e+02,TPR_10|PF13374.2|0.0042,TPR_19|PF14559.2|22,TPR_19|PF14559.2|10,TPR_19|PF14559.2|6.3e+02,TPR_19|PF14559.2|1e+02,TPR_19|PF14559.2|14,TPR_12|PF13424.2|7e+03,TPR_12|PF13424.2|33,TPR_12|PF13424.2|4.8e+03,TPR_12|PF13424.2|1.8e+02,TPR_12|PF13424.2|4.2e+03,TPR_12|PF13424.2|0.017,TPR_16|PF13432.2|55,TPR_16|PF13432.2|5.4e+02,TPR_16|PF13432.2|1.3e+02,TPR_16|PF13432.2|4.5e+03,TPR_16|PF13432.2|2.3 R_Transcript_195032:1-1977(+)
ANSQIKELVKAGNLKDARQLFDEMPQRDEVSWTNLITGYVAASDYDEALNLFSRMWVDPCIRMDPFALSVALKACGLNNSVNFGQLLHGVCLKNGLVNSVFVGSALLDMYAKTGKISESCRVFDEMPERNVVSWTAIITGLVKGGYCKEGLMYFSDMWFARLPCDAYSFAIALKACSDLCDLVHGMEIHTQAIKRGFDATSYVANTLATMYNKCGKLDYGMCLFGRMRIPDVVSWTSLITSYVQMGMGDIAVQQFLRMRSSDVRPNEYTFAAVLSACANHGKILWGKQLHGHVTRIGFVDALSVANSVVALYSRCGQLKLASVAFSAMTRRDIVSWSTIMAGYSQAGFGKETFEYFSWMRREGPKPTEFALASVLSVSGAMAILEQGRQVHAHALKVGLEHTSLVQSALITMYSKCGSIKHASDVYSCTGNDDVVCWTSMINGYAEHGHSQEAIDLFDRMLQVGMRPDSVTFIGVLSACSHAGLVDLGYYYFNFMSKKFQINPCKEHYGCMTDLLCRAGRLTEAESMIDSMPCGQDDVVWSTLLRACRVHGDVERGKRAAEMILEHNPNCAGTLTNLANIYSLKGKWREAANIRKMMKSKQVIKEPGSSWIKVKDDVSTFVSGDKSHPDRVQVYSVLHLLTSVIDMSVQDVDTLLHDA*

Click here to download the sequence:
Link to NCBI Protein BLAST