Transcript Information: R_Transcript_195159.p1


Annotated TAIR IDAT3G26350.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9653660-9654730 | Reverse length=356
E-Value3.4E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0794761854941
Replicate 20
Replicate 30.43104076121792
Condition 2: 8 Hour
Replicate 10.9215110464017
Replicate 20.84153856391559
Replicate 31.4150449139549
Condition 3: 24 Hour
Replicate 11.7280069956336
Replicate 21.1857666070203
Replicate 31.2355962323248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_195159.p1 GENE.R_Transcript_195159~~R_Transcript_195159.p1 ORF type:complete len:372 (+),score=28.97 R_Transcript_195159:75-1190(+)
ATGTCGGATGATGGGGAAACCAACCCACATTTTCAGCAACGGCCAGGGCCGGATTATCCACCTATCGAACCAGAACCTGTCCGGTCATGGGGACACCATCCCCACCCTCATCCCTATCCTCATTCTTATCAGCCTGATCAAATTCCACAGTCAAGTAGGATCAAGCGAAAGCCTCGGCAATCACACTCCCAGCCAGCACTGGTGACACCCCGCCCAAGGAGCCCGCCTGAACATGCTCGGCAACCATCATTGGCACCCCCAAGGCGAGATCAGCCACGCCCAGAATCCTATACTGTTGGGGTGCCACAAGTACAACAGCCTCAACCTCACCCACAATCCTACCCAGTAGAGGTGCCATCAGTACAACAGCCCCAACCTCACCCACAATCATACCCAGTAGAGGTGCCATGGGTACAACAGCCACAATTTCGCCCTGAGCGCCAGGCTCACCCCAAGCCACAACCACATCGGAACCAGCCCCACCATGGGAGTTACGAATATGGGGTTCCCCCACATCGACAGAACCTCATGTACCCGAAAACAAGCAAGACCAAACCTCTGACATGGTTTGGAGCAGTGTTCTGTGTCATCCTGTGGCTTGTCATAATTCTCGGAGGCCTCCTTGTGCTAGTGATATACCTCATGTACCGCCCCAGGACACCACATTTCGAGATATCTACTGCAAGCCTCAATGCTGCCTATCTCGATGTGGGCTATCTCCTAAATGCTGACCTGACATTGCTAGCCAACTTCACTAATCCTAACAAGAAGGTCAATGTCGACTTTAGCTATGTGATCCTCCAGCTATACTTTGATCGACACCTCATTTCTAATCAGTACATTGAGCCTTTCTCTGCTTTCAATACAGAGTCCAAACTTGCCAATGTGGAAATGGTAAGCAGCCAGGTTAGACTTCCTCTTGTCGTGACCCAAAAACTCATAAATGCAATACAGAGAAACAGGATTGTGTTTGAAGTTGATGGAATCTTTCATGCAAGATCAAATTTTGGGAGCCTTCTAAGGTATTCTTATTGGCTATATGCACATTGCCAAATTGAAATGACAGGGCCTCCAACAGGAATCATGTTAGCAAACAAATGTAGAACAAAGGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_195159.p1 GENE.R_Transcript_195159~~R_Transcript_195159.p1 ORF type:complete len:372 (+),score=28.97 R_Transcript_195159:75-1190(+)
MSDDGETNPHFQQRPGPDYPPIEPEPVRSWGHHPHPHPYPHSYQPDQIPQSSRIKRKPRQSHSQPALVTPRPRSPPEHARQPSLAPPRRDQPRPESYTVGVPQVQQPQPHPQSYPVEVPSVQQPQPHPQSYPVEVPWVQQPQFRPERQAHPKPQPHRNQPHHGSYEYGVPPHRQNLMYPKTSKTKPLTWFGAVFCVILWLVIILGGLLVLVIYLMYRPRTPHFEISTASLNAAYLDVGYLLNADLTLLANFTNPNKKVNVDFSYVILQLYFDRHLISNQYIEPFSAFNTESKLANVEMVSSQVRLPLVVTQKLINAIQRNRIVFEVDGIFHARSNFGSLLRYSYWLYAHCQIEMTGPPTGIMLANKCRTKD*

Click here to download the sequence:
Link to NCBI Protein BLAST