Transcript Information: R_Transcript_195236.p1


Annotated TAIR IDAT1G56340.1
Annotated Gene Namecalreticulin 1a
Annotated Gene Symbol(s)CRT1, CRT1a, AtCRT1a
Annotation TypeHomolog
Chromosome Positionchr1:21090059-21092630 | Reverse length=425
E-Value2E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50574954786374
Replicate 20.42309925272137
Replicate 30
Condition 2: 8 Hour
Replicate 10.18503172504216
Replicate 20.056324639398452
Replicate 30.22860970554644
Condition 3: 24 Hour
Replicate 10.57828229792706
Replicate 20.33332884973165
Replicate 30.49619481657954


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_195236.p1 GENE.R_Transcript_195236~~R_Transcript_195236.p1 ORF type:5prime_partial len:397 (+),score=61.18,Calreticulin|PF00262.14|3.4e-58,Calreticulin|PF00262.14|1.1e-19 R_Transcript_195236:1-1191(+)
GGAATGAACACTAAAGTAGTCTTACTCTTAGCGCTCGTAGCATTTGTTGCTGCTGAAGTCTTCTTTGAAGAAAAATTTGACAAAGATTGGGAAAGTCGCTGGGTCCATTCCACACACAAAGGAAGTGACGCCGGAAAATGGGTACTTTCACACGGAAAATATTTCAAAGATGCCAATGACGACCTTGGTATCCAAACCTCTGAAGATTACCGATTCTACCAAATCTCTGCCAAAACCAAGGAATTCTCCAACAAAGATGACACCCTTGTTCTCCAATTCTCCATCAAAAACGAACAAAACCTCGACTGTGGTGGTGGTTACGTTAAAATCCTCCCCGCTGGACTTAATCAAAAAGACTTCAATGGAGACTCTGATTACAATATTATGTTCGGTCCTGATATTTGTGGTGGATCCAAACGAGTTCACGTTATCTTCAACTACAAAGGAAAGAATCATCTCATCAACAAACAAATTGCCCCTGAGACTGATACCTTCACTCACGTCTACACCCTTATTGTCCGACCCGATCAAACTTACTCTGTTTTGATCGATAATGTTGAAAAACAATCAGGAAACTTACTTGAAGATTGGGACTTTTTACCCCCTAAGACAATCAAAGATCCTTCTGTCTCCAAACCCGCCGACTGGGTTGATGAAGCCAAGATCCCTGATCCCAACGCTGTTAAACCCGCTGGATGGGACGATATCCCCGAATACATTAACGATCCCTCTGCCACTATCCCTGAAGATTGGGACACTGAACTTGATGGTGATTGGGAAGCTCCTATTATCCCCAACCCTGACTACGAAGGTGAATGGAAAGCCCCCCTCATCCCCAACCCTGACTACAAAGGTCCTTGGGTTCATCCTCTCATTGACAATCCTGAATACAAAGAAGATAAAGAAATCTATGCTTACAAATCAAATGCTTTCGTTGGTATTGAAATCTGGCAAGTTAAATCTGGATCCATCTTTGACAACTTTTTGGTTACCAATGATGTCGCTTTAGCCGCCAAACAAGCCGATGCTATTGTCTCCCGCATTTCTGCCGAAAAATCTGCCCATGAAGCCGCCGAAGCTGAGCGACGAGCTGCTGAAGAGGAAGAACGAAAACGATTAGAAGCTGAACTTGCTGAAGAAGAGGAGGAAGATGCTCACGCTGGTCATGGTCATACCCACGACGAATTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_195236.p1 GENE.R_Transcript_195236~~R_Transcript_195236.p1 ORF type:5prime_partial len:397 (+),score=61.18,Calreticulin|PF00262.14|3.4e-58,Calreticulin|PF00262.14|1.1e-19 R_Transcript_195236:1-1191(+)
GMNTKVVLLLALVAFVAAEVFFEEKFDKDWESRWVHSTHKGSDAGKWVLSHGKYFKDANDDLGIQTSEDYRFYQISAKTKEFSNKDDTLVLQFSIKNEQNLDCGGGYVKILPAGLNQKDFNGDSDYNIMFGPDICGGSKRVHVIFNYKGKNHLINKQIAPETDTFTHVYTLIVRPDQTYSVLIDNVEKQSGNLLEDWDFLPPKTIKDPSVSKPADWVDEAKIPDPNAVKPAGWDDIPEYINDPSATIPEDWDTELDGDWEAPIIPNPDYEGEWKAPLIPNPDYKGPWVHPLIDNPEYKEDKEIYAYKSNAFVGIEIWQVKSGSIFDNFLVTNDVALAAKQADAIVSRISAEKSAHEAAEAERRAAEEEERKRLEAELAEEEEEDAHAGHGHTHDEL*

Click here to download the sequence:
Link to NCBI Protein BLAST