Transcript Information: R_Transcript_195238.p1


Annotated TAIR IDAT1G56340.1
Annotated Gene Namecalreticulin 1a
Annotated Gene Symbol(s)CRT1, CRT1a, AtCRT1a
Annotation TypeHomolog
Chromosome Positionchr1:21090059-21092630 | Reverse length=425
E-Value3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60843203182396
Replicate 20.11664611342388
Replicate 30.44540878659185
Condition 2: 8 Hour
Replicate 10.20404887456038
Replicate 20.12422712133992
Replicate 30.10084228122437
Condition 3: 24 Hour
Replicate 10.31885843371811
Replicate 20.24505843211753
Replicate 30.60799179685826


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_195238.p1 GENE.R_Transcript_195238~~R_Transcript_195238.p1 ORF type:5prime_partial len:360 (+),score=66.94,Calreticulin|PF00262.14|5.8e-56,Calreticulin|PF00262.14|1.4e-20 R_Transcript_195238:2-1081(+)
AAATCTACAAACAAGGGAAGTGATGCCGGTAAATGGAAACTTTCACACGGTACCTACTTTGCTGACGAAAAAGAAGATCTTGGAATCCAAACTTCTGAAGATTACAGATTTTATCAAATTAGCGCTGGTTTCAAGGAGTTTTCCAACAAAGACGATGTTCTTGTTCTCCAATATTCCATCAAAAACGATCAAAAACTTGACTGCGGAGGTGGTTATGTAAAACTTCTTCCTGCTGGACTTGACCAAACAAATTTTAATGGTGATTCTGAATACAATATTATGTTCGGCCCTGATATTTGTGGAGGAACAAAGAGAGTTCACGTCATTCTTACCTACAAAGGAAAGAACTACCTCATCAACAAACAAATCTCCCCAGAGACTGATTCCCTTACTCATGTTTACACTCTCATCGTTAGACCAGATCAAACCTACTCTGTATTGATCGATAACGTTGAAAAACAAAGTGGAAAACTTGTTGAAGATTGGGACTTCTTACCACCAAAAACTATCAAAGATCCAAATCTCTCCAAACCATCTGATTGGGTTGACGAAGCTACCATTCCTGACCCCGATGCTGTTAAACCTGAAGGCTGGGATGATGTTCCTGAATACATTGCTGATCCTGATGCCGCAATGCCTGAAGATTGGGATACCGATCTTGATGGTGATTGGGAAGCTCCAATTATTCCCAACCCAGACTTCCAAGGTGAATGGACTGCCCCACGAATTCCAAACCCTGCCTACAAAGGACAATGGGTTCATCCTCTTATTGACAACCCTGACTATTATGAAGACAACGAAATCTACTCCTTCAAGTCACACGCTTTCCTTGGTATTGAAATCTGGCAAGTTAAATCTGGATCCATTTTTGATAACTTTTTAGTCACCAATGACGTAGTCTTAGCTTCAAAAGAAGCTCAAGCCATCGTTAACCGAAGAGATGTCGAAAAAGTTGCTTCAGAAGAAGCTGATAGAATCAGAAGAGAAAAAGAAGAGGAAGAACGAAAACGATTAGAAGATGAACTCGAAGAAGAGGAAGAAGAAGATGCCCACGCTGGACACTCTCACGATGAATTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_195238.p1 GENE.R_Transcript_195238~~R_Transcript_195238.p1 ORF type:5prime_partial len:360 (+),score=66.94,Calreticulin|PF00262.14|5.8e-56,Calreticulin|PF00262.14|1.4e-20 R_Transcript_195238:2-1081(+)
KSTNKGSDAGKWKLSHGTYFADEKEDLGIQTSEDYRFYQISAGFKEFSNKDDVLVLQYSIKNDQKLDCGGGYVKLLPAGLDQTNFNGDSEYNIMFGPDICGGTKRVHVILTYKGKNYLINKQISPETDSLTHVYTLIVRPDQTYSVLIDNVEKQSGKLVEDWDFLPPKTIKDPNLSKPSDWVDEATIPDPDAVKPEGWDDVPEYIADPDAAMPEDWDTDLDGDWEAPIIPNPDFQGEWTAPRIPNPAYKGQWVHPLIDNPDYYEDNEIYSFKSHAFLGIEIWQVKSGSIFDNFLVTNDVVLASKEAQAIVNRRDVEKVASEEADRIRREKEEEERKRLEDELEEEEEEDAHAGHSHDEL*

Click here to download the sequence:
Link to NCBI Protein BLAST