Transcript Information: R_Transcript_1954.p1


Annotated TAIR IDAT2G41620.1
Annotated Gene NameNucleoporin interacting component (Nup93/Nic96-like) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17350419-17354997 | Reverse length=861
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.278706156294
Replicate 27.8267459141111
Replicate 311.018754357078
Condition 2: 8 Hour
Replicate 113.66398713574
Replicate 215.522844313859
Replicate 318.597297488298
Condition 3: 24 Hour
Replicate 118.806953688767
Replicate 213.144540454875
Replicate 318.565463796922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1954.p1 GENE.R_Transcript_1954~~R_Transcript_1954.p1 ORF type:complete len:896 (+),score=206.38,Nic96|PF04097.10|1.4e-103 R_Transcript_1954:98-2689(+)
ATGGCGAACGAAGCAGACATGAGTGGATGGACGGACCTTCTCCACTCTTCTACAAAGCTTCTCGAACAAGCTGCTCCTTCTGCTCAGTTCCCTCCTTTACAGAGGAATTTGGAGCAATTGGAAGCGTTGTCAAAGAAGCTCAAGGCTAAAACCCTAAGGACCGAAGCTCCTTCTCAATCTATTGCCGCCACCAGGTTGCTTGCTCGTGAAGGGATCAATGCAGAGCAACTTGCAAGAGATCTGAAATCTTTTGAACTAAAGACTACATATGAGGATGTTTTCCCAGCTGAGGCAACTACGGTGGAAGATTATCTGCAACAGGTACATGAGATGGCAATGCTATCAGCTATCCAGGAAGCTCAGAAAGATAATCTGAGAAATTTCAATGACTACACGATGAAGGTTTTGGAGGATGATTGGCAAAAGGAGAAAAGGGATTTTCTTCAGAGCTTGAGCCGGATTTCAACATTACCCCGAACTAATACTGGTGAAACAGCTAGTGCCATTACTCGTCCTGGTCAAATCGTATCAGTGGCTTCTACTCCTCAGGCCTTTAGTGGCCCCTCTAGTATGGAGATTGTACCGCATGCTACTAAGCCCATCCAGGAGAAAAAAGCTTCTGCCTATGCTGAGGTTGTCAAAATTCTCAATAATGCAAGGGAACGAGCTTCACCATTCAAACCTGCTACAGCTTTCAAGGCTGCTTTTGAAAGTTTGGGTGTTGAGACATCTGGCGCAAAATCAGTTGGCACGCAGAAGATATGGAACCTTGTTCAGACATTGGTGGGTGAAGATTTAAGCATTCAGCAGAATGTGTCGACGAAAATGTCATTGGTGAACGGAGCAAGGCGACATCTAGAGTGGGGACATGCAAAACATGTTGTTGAAACAATTCAAAATCATCCCGTACAGGCTGCTCTTGGTGGCTCTGTTGGTAATCTTCAAAGAATACGTGCTTTTCTACGAATCCGTTTAAGAGATCACGGAGTTTTAGATTTTGATGCTGTTGATGCTAGGAGGCAACCTCCATTGGATACAACTTGGCAACAGATGTACTTCTGTTTGAGAAGTGGATATTATGACGAAGCAAGGAGTGTAGCTCAGTCATCTCGGGCTTCGCTACATTTTGCTCCACAGATTTCAGAATGGATAGCTACTGGAGGTTTAGTCTCTGCAAATACAGCTTCTGCTGCTGCGGAAGAATGTGAGAAAATGTTCAGAATGGGCGATCGTGGGGCTCGAGCAGTCTATGACAGAAAGAAACTCGTACTTTATGCTATTGTTTCTGGTTCTCGCAGGCAGATAGACCGCTTGCTTAGGGAGTTCCCAAATCTTTTTAATACCATAGAGGACTTCTTATGGTTCCAACTGTGTGCCATACGTGACAGTCCTCGTGGATCCTCATCTTCTATTCTCAATGAGGGATCAGCACCTTACACTTTGGAGGATCTACAGACGTATCTGAACAAGTTTGAGCCATCTTACTACACTAAGGGTGGAAAGGACCCTCTCATGTACACTTATGTTTTGCTTCTGAGCATTCAGTTGCTGCCAGCTGTCATGCACTTGTCGAAGGAGATGGGTGATGAAGGGTTCAACATTGATGCTGTCCATATAGCAATGACATTTGCTGATCATGGGGTCCTTTCAGAAGGTGCTGCTTCAGGGCAGAAGCTGGCAGTGATGGATGCTTTTGCTGAAGTATCCAGTATGATTAGGCAGTATGGCTCAGCATACTTACGAGTTGGAAATCTTTCCATGGCATTGGAATACTATGCACAATCAGCTGTTGCTGTTGGAGGTGGCCAGTTATCATGGGTAGGGAGGGGTAGCTTAGATCAGCAAAGGCAGAGGAGCTTAATGCTGAAACAGCTTCTTACTGAGTTGTTGCTACATGATAATGGACTTTATCTCCTGCTTGGACCAAGAGGCGCCGGAGAAGAAGCTGAGTTGAGGCGGTTTTTTACCGATGCTGCAACAAGACGACAGTTTTTGCTTGAAGCAGCTTTCCGGTGTCAAGAAACTGGGTTATATGACAAATCGATAGAGATTCAGAAGAGGATTGGTGCTTTTGGGATGGCTTTGGACACAATTAATAAGTGCCTGTCAGAAGCAATATGTTCCTTGTCACGGGGCAGACTGGATGGCGATAGCCGAACAGCTTCTCTGATTCATTCCGGCAATGAGATACTAGAGATGTGCAAATATTATACTGAGATCAGTGTAAAAGAGAGGGATCATGTTTTGGAACAAGAAATAGTCTTGAGGCAGCTCGAGGCGATACTGTCAATTTATGAGCATGCGAGACAGGGTCGCCATATGGATGCTTTGAGGGAGATTGCCAAGCTTCCTTTCCTTCCACTGGATCCACGTTCACCAGATTTGACAATGGATTCATTCCAGAATTTGTCTCCCCATGTTCAGGCTTGTATCCCGGACTTGCTCAGAGTTGCCTTAAGTTGTCTAGAGAACGTGACAGATACAGATGGATCTCTTCGTGCTTTGAGAACAAAGATTGCAAATTTCCTTGCAAACAATTTGCACAGAAATTGGCCACGTGATTTGTATGAAAAGGTTGCGCGAAGTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1954.p1 GENE.R_Transcript_1954~~R_Transcript_1954.p1 ORF type:complete len:896 (+),score=206.38,Nic96|PF04097.10|1.4e-103 R_Transcript_1954:98-2689(+)
MANEADMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLEQLEALSKKLKAKTLRTEAPSQSIAATRLLAREGINAEQLARDLKSFELKTTYEDVFPAEATTVEDYLQQVHEMAMLSAIQEAQKDNLRNFNDYTMKVLEDDWQKEKRDFLQSLSRISTLPRTNTGETASAITRPGQIVSVASTPQAFSGPSSMEIVPHATKPIQEKKASAYAEVVKILNNARERASPFKPATAFKAAFESLGVETSGAKSVGTQKIWNLVQTLVGEDLSIQQNVSTKMSLVNGARRHLEWGHAKHVVETIQNHPVQAALGGSVGNLQRIRAFLRIRLRDHGVLDFDAVDARRQPPLDTTWQQMYFCLRSGYYDEARSVAQSSRASLHFAPQISEWIATGGLVSANTASAAAEECEKMFRMGDRGARAVYDRKKLVLYAIVSGSRRQIDRLLREFPNLFNTIEDFLWFQLCAIRDSPRGSSSSILNEGSAPYTLEDLQTYLNKFEPSYYTKGGKDPLMYTYVLLLSIQLLPAVMHLSKEMGDEGFNIDAVHIAMTFADHGVLSEGAASGQKLAVMDAFAEVSSMIRQYGSAYLRVGNLSMALEYYAQSAVAVGGGQLSWVGRGSLDQQRQRSLMLKQLLTELLLHDNGLYLLLGPRGAGEEAELRRFFTDAATRRQFLLEAAFRCQETGLYDKSIEIQKRIGAFGMALDTINKCLSEAICSLSRGRLDGDSRTASLIHSGNEILEMCKYYTEISVKERDHVLEQEIVLRQLEAILSIYEHARQGRHMDALREIAKLPFLPLDPRSPDLTMDSFQNLSPHVQACIPDLLRVALSCLENVTDTDGSLRALRTKIANFLANNLHRNWPRDLYEKVARSL*

Click here to download the sequence:
Link to NCBI Protein BLAST