Transcript Information: R_Transcript_195478.p1


Annotated TAIR IDAT2G32640.1
Annotated Gene NameLycopene beta/epsilon cyclase protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13847197-13850811 | Reverse length=585
E-Value1.1E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2423481278081
Replicate 20.87942619544704
Replicate 31.5590973232983
Condition 2: 8 Hour
Replicate 10
Replicate 21.2877994777646
Replicate 31.4730364639581
Condition 3: 24 Hour
Replicate 11.5024742950068
Replicate 20.34641767890959
Replicate 30.74486953122949


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_195478.p1 GENE.R_Transcript_195478~~R_Transcript_195478.p1 ORF type:5prime_partial len:382 (+),score=64.47 R_Transcript_195478:2-1147(+)
CCAGTAAAGCTCATAGATATCGTGAAACAACGTTTCAGTTCCCTTGGTGGTGTGATCTTGGAAGATTGTAGTGTTTCTAACGTCAGCGTGTATGATGATGCAGCGGTCTTGCAACTATCTGATGGGAATATTTTGTCTTCACGCCTAATTATTGATGCTATGGGAAACTTTTCTCCTATTGTCAGGCAGGTAAGACGTGGAAGGAAGCCTGATGGTGTTTGTCTGGTTATTGGTTCTTGTGCGCATGGCTTCAGCAATAGCACTACAAGTGATGTCATCTACAGTAGTTCATCAGCCAAGAGAATTGGTCAGACAGATGTGCAATTGTTTTGGGAGGCATTTCCTGCCGGTTCCGGTCACATGGATCGAACAACTTACATGTTCACATATCTTGATCCTCAGCCAGCATGCCCTTCACTTGAAGATCTCTTAGAAACTTACTGGGAACTGATGCCCAAATATCAGGGTGTTTGCCTTGATGATCTCAAGATCATGAGAGTAATATATGGCATATTTCCAACTTATCGTGACAGTCCACTGCCAGCAGCTTTTAACCGTATTCTACAGTTTGGTGATGCTAGTGGCATTCAATCCCCGGTTTCATTTGGTGGTTTTGGAAGCTTGACAAGACACATTAAGAGATTGTCCAACGGTATTTATGAAGCATGCGAGGGCAATTTTCTTGATTTATACAGCTTATCTTTGCTGAATCCATACTTGCCCAACTTAAGTGCCTCTTGGCTATTCCAAAGAGCAATGTCAGCAAAGCAAATGCCAGATGTTTCGCCTTCTTTCATCAATGAGTTGCTTCATGCCAATTTTCAGAGCATGGAGAAACTGGGTGATCCTGTCCTGAGACCATTTCTTCAGGATGTCATTCAATTTGGGCCTCTGGTCAAAACACTGGGACTTGTCATGCTTAATAAACCTCAGATTATTCCTTCCATATTCAAGCAGGTTGGAATTCCTGTGCTGATAGACTGGTTAGGCCATTTTCTCATGCTTGGCTATTACACATTCCTCTCAAGTTATGTGGATCCTCTAATTAGGCCTTCAATCAATACATTTCCCCCGAAAATGAAGTTCCAATGGAATCGTTATCTTGATGCATGGAAATATGGGGCTGGTTTAGACTACAAACTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_195478.p1 GENE.R_Transcript_195478~~R_Transcript_195478.p1 ORF type:5prime_partial len:382 (+),score=64.47 R_Transcript_195478:2-1147(+)
PVKLIDIVKQRFSSLGGVILEDCSVSNVSVYDDAAVLQLSDGNILSSRLIIDAMGNFSPIVRQVRRGRKPDGVCLVIGSCAHGFSNSTTSDVIYSSSSAKRIGQTDVQLFWEAFPAGSGHMDRTTYMFTYLDPQPACPSLEDLLETYWELMPKYQGVCLDDLKIMRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHIKRLSNGIYEACEGNFLDLYSLSLLNPYLPNLSASWLFQRAMSAKQMPDVSPSFINELLHANFQSMEKLGDPVLRPFLQDVIQFGPLVKTLGLVMLNKPQIIPSIFKQVGIPVLIDWLGHFLMLGYYTFLSSYVDPLIRPSINTFPPKMKFQWNRYLDAWKYGAGLDYKL*

Click here to download the sequence:
Link to NCBI Protein BLAST