Transcript Information: R_Transcript_196021.p1


Annotated TAIR IDAT5G21160.3
Annotated Gene NameLA RNA-binding protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7198817-7203879 | Reverse length=833
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3252179560151
Replicate 20.80240638533623
Replicate 31.8967362340763
Condition 2: 8 Hour
Replicate 12.0274920020012
Replicate 21.9939639858382
Replicate 32.1966917311296
Condition 3: 24 Hour
Replicate 12.4858772157387
Replicate 21.2643142039184
Replicate 33.0670668988009


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196021.p1 GENE.R_Transcript_196021~~R_Transcript_196021.p1 ORF type:internal len:157 (+),score=24.42,La|PF05383.13|8.3e-18 R_Transcript_196021:2-469(+)
TCACCACGAGGAGATCCTAGTGTGAATGGTCCCAACCTCTCAAACAGAAGACCCAATGTCCCTGAAGCTGGTGGTCATGCATACACAGCATGGCATTATCCACGAGCATATGGCCCCAGAGACAGCATACTAAACCAAACTATGGCTAGGGCTTATGCACGACCTTCATTTTTTGGGCCAGCCCCACCGTTCGTAGGTGGACCAAGCTTCCCTGGCCCTGCACCAATGTATTACATTCATGCTGCACCTCCTGGTTCTATTAGGGCACCTTTCCCAGCACGCTTTGCTCCACATCCAATAAATACTATGGTCCCCATGCTACCACCAGAGTCAGTAGTATTGATAGATAACATTGTGCAGCAGATTGAGTACTATTTCAGTGATGAGAATCTGCAGACTGATCATTACTTAATTTCTCAAATGGACGATCAAGGATGGGTTCCAATATCAATCATTGCTGATTTTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196021.p1 GENE.R_Transcript_196021~~R_Transcript_196021.p1 ORF type:internal len:157 (+),score=24.42,La|PF05383.13|8.3e-18 R_Transcript_196021:2-469(+)
SPRGDPSVNGPNLSNRRPNVPEAGGHAYTAWHYPRAYGPRDSILNQTMARAYARPSFFGPAPPFVGGPSFPGPAPMYYIHAAPPGSIRAPFPARFAPHPINTMVPMLPPESVVLIDNIVQQIEYYFSDENLQTDHYLISQMDDQGWVPISIIADFK

Click here to download the sequence:
Link to NCBI Protein BLAST