Transcript Information: R_Transcript_196078.p1


Annotated TAIR IDAT1G11112.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3713220-3713456 | Reverse length=78
E-Value4.1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.523283976375
Replicate 210.406861945469
Replicate 316.532688873745
Condition 2: 8 Hour
Replicate 115.969042356899
Replicate 212.055431949161
Replicate 311.99584701869
Condition 3: 24 Hour
Replicate 19.9816553163931
Replicate 215.726358513281
Replicate 319.794098151629


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196078.p1 GENE.R_Transcript_196078~~R_Transcript_196078.p1 ORF type:complete len:115 (+),score=23.88 R_Transcript_196078:944-1288(+)
ATGATGGGTTTTGTTAAAAGCTTTGGGTGGATGAAAAAGAATGGGTATAAGAAGCAATGCAGGAGCTTGTTTTGGAGAGTCAGAGCAGCAGTAAAGAAGAGTGTGAAATGTAGTAACCAAAATGGGCCCAAAAAAAGGCAGCTCAGATTTCATTATGATCCTTCAAGTTATGCTCTCAATTTTGATGATGGGTCTACAAGAGCTGCCATTGCTAGTGGATTAAGAAGAGGAGATTTGATCAAGGGGGCTGAAAATGATTTATCATGTTACAAGCTTTATTGTCTCTATTTCATTTCTGCAAATACTAATATTAGTTGGGTTTATGTTATTTTAGTCACTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196078.p1 GENE.R_Transcript_196078~~R_Transcript_196078.p1 ORF type:complete len:115 (+),score=23.88 R_Transcript_196078:944-1288(+)
MMGFVKSFGWMKKNGYKKQCRSLFWRVRAAVKKSVKCSNQNGPKKRQLRFHYDPSSYALNFDDGSTRAAIASGLRRGDLIKGAENDLSCYKLYCLYFISANTNISWVYVILVTV*

Click here to download the sequence:
Link to NCBI Protein BLAST