Transcript Information: R_Transcript_196254.p1


Annotated TAIR IDAT1G30890.1
Annotated Gene NameIntegral membrane HRF1 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10994890-10995999 | Forward length=269
E-Value2E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.312574395486
Replicate 22.0996300416298
Replicate 31.9513146841167
Condition 2: 8 Hour
Replicate 11.7230793851765
Replicate 21.7391796987589
Replicate 31.8151610620387
Condition 3: 24 Hour
Replicate 11.6155493975051
Replicate 21.388664448666
Replicate 31.864508177032


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196254.p1 GENE.R_Transcript_196254~~R_Transcript_196254.p1 ORF type:complete len:270 (+),score=32.96,YIF1|PF03878.11|1e-54 R_Transcript_196254:291-1100(+)
ATGTATGACAATATTGGAGCGCAGTCTGGTTTGTCAAGACCAAACACTGCACAGGCTTATCCATTTGGAAATCCCTTCACTGCAGCGGGTTCAGGATTTATCCGAGGTGGTTTGGGTGCATATGGGGAGAAGATTTTGGGTTCCAGTTCTGAGTATGTTCAAAGCAATATAACTAGATACTTCTCTGATCCCCAATACTACTTTCAAGTGGATGATCACTATGTGAGGAACAAGTTGAAGGTTGTTCTATTTCCCTTTCTGCACAGGGGTCCTTGGACAAGAATAAGCGAGCCAGTGGGTGGAAGACTCTCCTATAAACCTCCAATTTACGATATAAATGCTCCAGATTTGTACATCCCCTTCATGGCACTTGGTACCTATGTTGTTTTTGCTGGGCTTCTGCTGGGACTTCGTGGAAACAGGTTTATCCCAGAAGCACTGAATTTGCTATTTGTTAAAGGATTATTAGGGTGGTTTTTGCAAGTCTCGTTGTTGAAAGTATCACTGTTTTCGTTGGGTAGTGGGGAAGCGCCTTTGCTTGACATTGTGGCTTACGCTGGTTACACGTTTACTGGCTTGTCTTTAGCTGTCCTTGGAAGGATTATCTGGAGTTACTCATACTATTTCTTGATGCCTTGGACCTGCCTTTGTACTGGAACCTTCTTGATCAAGACTATGAAGCGAGTTCTTTTTGCCGAGGTGAGGAGTTATGATTCAAGTAGGCATCACTATCTGTTACTCTTTATTGCTTTGGCTCAGTTCCCACTTTTTGTCTGGCTTGGTAATGTCAGTATTCACTGGCTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196254.p1 GENE.R_Transcript_196254~~R_Transcript_196254.p1 ORF type:complete len:270 (+),score=32.96,YIF1|PF03878.11|1e-54 R_Transcript_196254:291-1100(+)
MYDNIGAQSGLSRPNTAQAYPFGNPFTAAGSGFIRGGLGAYGEKILGSSSEYVQSNITRYFSDPQYYFQVDDHYVRNKLKVVLFPFLHRGPWTRISEPVGGRLSYKPPIYDINAPDLYIPFMALGTYVVFAGLLLGLRGNRFIPEALNLLFVKGLLGWFLQVSLLKVSLFSLGSGEAPLLDIVAYAGYTFTGLSLAVLGRIIWSYSYYFLMPWTCLCTGTFLIKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFVWLGNVSIHWLF*

Click here to download the sequence:
Link to NCBI Protein BLAST