Transcript Information: R_Transcript_196437.p1


Annotated TAIR IDAT1G02150.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:408779-410433 | Forward length=524
E-Value6.1E-205
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3141277395107
Replicate 24.5132234539706
Replicate 35.737388482027
Condition 2: 8 Hour
Replicate 16.0413722860493
Replicate 26.018629878749
Replicate 36.8535053183517
Condition 3: 24 Hour
Replicate 17.2520923766019
Replicate 26.8433139735249
Replicate 37.9368499238469


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196437.p1 GENE.R_Transcript_196437~~R_Transcript_196437.p1 ORF type:complete len:535 (+),score=97.44,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|0.43,PPR|PF01535.16|0.0037,PPR|PF01535.16|43,PPR|PF01535.16|1.1,PPR|PF01535.16|31,PPR|PF01535.16|0.013,PPR|PF01535.16|0.043,PPR|PF01535.16|21,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|5.9,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|9.3e+02,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|3e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|10,PPR_3|PF13812.2|18,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|1.8,TPR_19|PF14559.2|2.3,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|47,TPR_19|PF14559.2|1.3e+03 R_Transcript_196437:219-1823(+)
ATGATTCTACAATCAACCCTTAAACCACCAACCCCAAATTCATTATCCTCAGCACTCTCTTTTTCCCTGTCTTCGCCAGCTGGATCCCACTCTTTGGTTCATTTTCCAGCAATTAAAACCCACAATCCTTCAATAAAGTGCTCCTCAATACACCAAATATATAGCTATGGATCTGTTGACTATGAAAGAAGACCACCACTCAAGTGGAACCATGTTTATAAGAGGATTTCTTTGATGGAGAACCCTGAAATGGGTGTGGCTTCTGTGTTGAACCAGTGTGAAAAAGAAGGCAAAAGGCTCAATAAATATGAGCTTTCTAGGATTGTTAGAGAGCTTAGAAAGTTTAGAAGATTCAAGCTTGCTCTTGAGGTCTATGAATGGATGAATAATAGGATAGAGAGATTCAGGCTGTCCAGCAGTGATACAGCCATCCAATTGGATCTAATTGCCAAAGTTCATGGGGTCTCAAGGGCTGAGGAATATTTCGTGAGGATACCTGATACAGTGAAAGACAATCGAATATATGGGGCACTCTTGAATGCATATGCGGGGTCCAGAGTAAGAGACAAAGCGGAGTTCTTGATGGAGCAAATGAGAAAAAAAGGTTATGCTAATCATCCACTTCCCTTTAATGTAATGATGACTCTGTACATGAAACTCAATCAATATGATCAAGTTGAGGAGCTGATATCAGAAATGACACAGAAAAATGTGCGCCCAGATTTGTATTCGTACAATATTTGGCTGTCTGCTCGTGGTTCTCGAGGTTCTGTTGAAGGGATGGAGCAAGTCTTTGAACAGGTAAAATTGGACCCAAGTATTAATCCTAATTGGACTACATTCAGCACAATGGCTGCATTCTACATTAAGTTCGGTCATCTTGACAAAGCTGAGCAGTACCTCAAAAGCCTTGAGACTAGAATCACCACACGGGATAGAATGCCATATCATTATCTTATAAGCCTATATGGTAGCTTGGGAAACAGAGAAGAGGTGTATCGTATCTGGAACATGTATAAATCAAGTTTCCCCAGTATCCCGAATTGGGGATATCATTCTGTGATCTCCGCACTTGTCAGGCTGGGTGACATTGAGGGTGCTGAGAAAATCTATGAGGAGTGGCTTCCTGTGAAGACGACCTATGACCCTAAGATCGGAAACCTTCTCATGGGTTGGTATGTCAGGGAAGGGCCTTTTGAGAAAGCCAAGGAGTTCTTTGATCAATTGGTTGAAACTGGAGGGAAACCGACTTCAGGCTCATGGGAGATTCTCGGAGAAGGTCGCATTAAAGAGGGCATGATTTCTGAAGCATTGTCTTGCTTCAAGGAAGCTGCTCTAGTTGATGATTCCAAGAAGTGGAAGCCAAAACCCTCTAATATCTCTGCCTTACTAGAGCTATGTGACGAAGAAGGTGATGTAGCTAGTAAGGAGGAGTTTGTTGGGTTGTTGAGACAACTAGGCTGCTCTCAAGATGAAGCTCACAGTTCACTTCAAGTTTGTGAAGGTGATGATGAGCTTATGCCTAATAACAGATCTAATACTGATAATGGAACCGAAGAAAATGAGGGCGACAATCCGGAATTGTTACTTTCATTTTCAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196437.p1 GENE.R_Transcript_196437~~R_Transcript_196437.p1 ORF type:complete len:535 (+),score=97.44,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|0.43,PPR|PF01535.16|0.0037,PPR|PF01535.16|43,PPR|PF01535.16|1.1,PPR|PF01535.16|31,PPR|PF01535.16|0.013,PPR|PF01535.16|0.043,PPR|PF01535.16|21,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|5.9,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|9.3e+02,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|3e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|10,PPR_3|PF13812.2|18,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|1.8,TPR_19|PF14559.2|2.3,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|47,TPR_19|PF14559.2|1.3e+03 R_Transcript_196437:219-1823(+)
MILQSTLKPPTPNSLSSALSFSLSSPAGSHSLVHFPAIKTHNPSIKCSSIHQIYSYGSVDYERRPPLKWNHVYKRISLMENPEMGVASVLNQCEKEGKRLNKYELSRIVRELRKFRRFKLALEVYEWMNNRIERFRLSSSDTAIQLDLIAKVHGVSRAEEYFVRIPDTVKDNRIYGALLNAYAGSRVRDKAEFLMEQMRKKGYANHPLPFNVMMTLYMKLNQYDQVEELISEMTQKNVRPDLYSYNIWLSARGSRGSVEGMEQVFEQVKLDPSINPNWTTFSTMAAFYIKFGHLDKAEQYLKSLETRITTRDRMPYHYLISLYGSLGNREEVYRIWNMYKSSFPSIPNWGYHSVISALVRLGDIEGAEKIYEEWLPVKTTYDPKIGNLLMGWYVREGPFEKAKEFFDQLVETGGKPTSGSWEILGEGRIKEGMISEALSCFKEAALVDDSKKWKPKPSNISALLELCDEEGDVASKEEFVGLLRQLGCSQDEAHSSLQVCEGDDELMPNNRSNTDNGTEENEGDNPELLLSFSE*

Click here to download the sequence:
Link to NCBI Protein BLAST