Transcript Information: R_Transcript_196440.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.22409395827638
Condition 3: 24 Hour
Replicate 10
Replicate 20.27228714679725
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196440.p1 GENE.R_Transcript_196440~~R_Transcript_196440.p1 ORF type:internal len:81 (+),score=12.25,PPR_2|PF13041.2|4.7,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|6.7e-05,PPR_1|PF12854.3|0.0082,PPR_1|PF12854.3|0.81,PPR_1|PF12854.3|1.2e+03,PPR|PF01535.16|0.045,PPR|PF01535.16|0.26 R_Transcript_196440:3-242(+)
TTGTCAACCAAGATTCGACCTGACAAGCATTCTGTGGGTATTCTTGTTACTTGTTACTGTCGCTTAGGCCGTGTCGAATTTGGGTTCTCCCTCCTTGGTAAACGCCTTAAGCTTGGTTATCCTCTCAATGATGTCATCTTCAACACTCTCCTTAATGACCTTATCCAAATCGACCAGTTGCCTCAGGCTGTTCGATTGCTGGATAAAATTGTCAAGCTTGGCCTACAACCAGACATTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196440.p1 GENE.R_Transcript_196440~~R_Transcript_196440.p1 ORF type:internal len:81 (+),score=12.25,PPR_2|PF13041.2|4.7,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|6.7e-05,PPR_1|PF12854.3|0.0082,PPR_1|PF12854.3|0.81,PPR_1|PF12854.3|1.2e+03,PPR|PF01535.16|0.045,PPR|PF01535.16|0.26 R_Transcript_196440:3-242(+)
LSTKIRPDKHSVGILVTCYCRLGRVEFGFSLLGKRLKLGYPLNDVIFNTLLNDLIQIDQLPQAVRLLDKIVKLGLQPDIV

Click here to download the sequence:
Link to NCBI Protein BLAST