Transcript Information: R_Transcript_196442.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.19791213127331
Replicate 20
Replicate 30.18868710936981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196442.p1 GENE.R_Transcript_196442~~R_Transcript_196442.p1 ORF type:internal len:116 (+),score=21.54,PPR_2|PF13041.2|5.2e+03,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.0026,PPR_2|PF13041.2|1.3e-05,PPR|PF01535.16|0.0084,PPR|PF01535.16|0.022,PPR_1|PF12854.3|4.9e+03,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|2e+03 R_Transcript_196442:1-345(+)
CCTCTTCCTACTGTCATTGATTTCAATCAGCTATTTACTGCAATGCTCAAGATCAAACCTTTCCCACCTTTCTCCACTGTCATCTCTCTCTCCAGGCATTTGGAATTGTCAACCAAGATTCGACCTGACAAGCATTCTGTGAGTATTCTTGCTACTTGTTATTGTCGCTTAGGCCGTGTTGATTTTGGGTTCTCTCTTCTAGGTAAACTCCTTAAGCTTGGTTATCCTCTCGATGCTGTCATCTTCACTACTTTACTTAATGGCCTTATACAAATTGACCAATTTCCCCAAGCTGTTCGATTGCTGGATAAAATTGTCAAGCTTGGCCTACAACCAGACATTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196442.p1 GENE.R_Transcript_196442~~R_Transcript_196442.p1 ORF type:internal len:116 (+),score=21.54,PPR_2|PF13041.2|5.2e+03,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.0026,PPR_2|PF13041.2|1.3e-05,PPR|PF01535.16|0.0084,PPR|PF01535.16|0.022,PPR_1|PF12854.3|4.9e+03,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|2e+03 R_Transcript_196442:1-345(+)
PLPTVIDFNQLFTAMLKIKPFPPFSTVISLSRHLELSTKIRPDKHSVSILATCYCRLGRVDFGFSLLGKLLKLGYPLDAVIFTTLLNGLIQIDQFPQAVRLLDKIVKLGLQPDIV

Click here to download the sequence:
Link to NCBI Protein BLAST