Transcript Information: R_Transcript_196450.p1


Annotated TAIR IDAT1G54940.1
Annotated Gene Nameplant glycogenin-like starch initiation protein 4
Annotated Gene Symbol(s)PGSIP4
Annotation TypeHomolog
Chromosome Positionchr1:20481690-20484541 | Forward length=557
E-Value5E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4266942309742
Replicate 21.0922930852409
Replicate 30.92686221487322
Condition 2: 8 Hour
Replicate 11.981515082436
Replicate 22.4558193929626
Replicate 31.6787616758739
Condition 3: 24 Hour
Replicate 12.6540817604282
Replicate 20.89240931927191
Replicate 32.4038519598327


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196450.p1 GENE.R_Transcript_196450~~R_Transcript_196450.p1 ORF type:5prime_partial len:173 (+),score=21.51 R_Transcript_196450:1-519(+)
TCGGCTAGACCTAATCATAAGTGGCTCTTCAACTCCGGGATTATGATCCTAGAACCTTCTCAGTGTTTCTTTGACAACTTGATGAGCAAACGCTACTCAATAAAATCTTACAATGGTGGTGATCAAGGGTATCTTAACGAGATATTTACATGGTGGCATAGACTTTCAGCTAAATTGAGCTTTATGAAGTTCTTTATGAAAGAAGGTGGGGATCGCGTTGTTCCTAAGGATCGATACACAATTCATTTCTTCGGATGGAAGCCATGGGTATGCTACAGAGACTATGATTGCAATTGGGATAGAAAAGGGCATCAAATATTTGCAAGTGATGATGCTCATGCAATTTGGTGGCAAGTGTATGATTCAATCCCGGCTGAATTGCAACCCTATTGTTCGATGACAAAAGAACATGATTCAATGCTCCGAAGAAGAAGAGAAAGCGCTCAGAAGGCTAATCTTTCTGACGGCCATTGGAAGATTGAGATCAAAGATCCTAGACAGTTTCATTTGGTCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196450.p1 GENE.R_Transcript_196450~~R_Transcript_196450.p1 ORF type:5prime_partial len:173 (+),score=21.51 R_Transcript_196450:1-519(+)
SARPNHKWLFNSGIMILEPSQCFFDNLMSKRYSIKSYNGGDQGYLNEIFTWWHRLSAKLSFMKFFMKEGGDRVVPKDRYTIHFFGWKPWVCYRDYDCNWDRKGHQIFASDDAHAIWWQVYDSIPAELQPYCSMTKEHDSMLRRRRESAQKANLSDGHWKIEIKDPRQFHLVN*

Click here to download the sequence:
Link to NCBI Protein BLAST