Transcript Information: R_Transcript_196451.p1


Annotated TAIR IDAT1G54940.1
Annotated Gene Nameplant glycogenin-like starch initiation protein 4
Annotated Gene Symbol(s)PGSIP4
Annotation TypeOrtholog
Chromosome Positionchr1:20481690-20484541 | Forward length=557
E-Value8.3E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78004106644097
Replicate 20.61014890098644
Replicate 30.62650906245887
Condition 2: 8 Hour
Replicate 10.167424717588
Replicate 20
Replicate 30.27925554800595
Condition 3: 24 Hour
Replicate 10.35319703427237
Replicate 20.71632464772815
Replicate 30.7857124759399


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196451.p1 GENE.R_Transcript_196451~~R_Transcript_196451.p1 ORF type:5prime_partial len:585 (+),score=78.60,Glyco_transf_8|PF01501.16|2.1e-07 R_Transcript_196451:3-1757(+)
AACATGGGTTTCTCCAAGCCTGGCTTACCAACAAACATTAATGCATCCCCCCTTAGTAGTTCACTATCATCTTACCAAAATTTCATAATCTTTTCTCTCCTAATGCTCTTCTTCTTCCCTCTCCTCCTCTTTACCGTCGTCTTCCCTAACCTCCAAATCATGGAACTCATTTGTTTCCAGACTCAGTCTCCAGCCTCATTGGCTCCCCACATCAATCATAAAGTCAAAGTTCCTAAATGGCTTGAAGTCATCCAAGGTCCTCATGGCCAACTTGCTCAATTTCATAAACCCCTCAAGTTGGGCCTAGTCAACTTTCATGACACCACGCGATTCCAGCAGATCAACCTTTTGCATGGAATCGTGCATGGTGTAACTATAGGTTTCGACATGGTTTCATCCAACGTCACCTGGAAGAAACTTTTCCCAGAGTGGATAAATGAGGGCACTTCTTCTAATACGTGCCCTCATATCCCCATGCCCGAGCCTGGAAAGTACCCCAGGCTCGACGTGGTGGTGGTACAGTTGCCATGTACTACTAATGGTAAATTAAACAAAATGAAGGAGGGAATGAGGGATGTTCAAAGGCTGCAGGTGAGCCTAGCCGCCGGCCATCTAGTGGTGGATCAAAATGGAATTGGTGGCTCAGGCAAAGATATGTATGTGGTGTTTGTAGGAAAATGTGAGCAAATGGTGGAGATATTCAAGTGTGATGACTTGGTATGGCATGATGGAGAGTATTGGGTGTATAAGCCTAAGATAGATAGGTTAAAAGAGGTGATTAGCATGCCTGTGGGAACTTGTGGCCTTGCCCCTCCTTACTTGCCAGCTCCAGGTAGCAGGCAGTTGCAAGGCAATAATCCAAAACTAAAAAAACAGAACAAGCAGCAAAAGGCAAGAGAAGCCTATGTAACAGTGATTCACTCTTCTGAACGTTATGTATGTGGAGCCATAGCTCTAGCACAAAGCATTCGCCAAACAAACAGCACCAAGGACTTAGTCCTTTTAGCAGATCACTCGATTTCCAATCACTCCATTGCAGGCCTCGAAGCTGCAGGTTGGAAGATGAAGCGGATTGAAAGAATCCGAAGCCCCAATGCCACGCCAAATGCTTATAACAGGTGGAATTACAGCAAGCTTAGGGTGTGGGAATTGACGGACTATGACAAGCTCATGTTCATAGACTCCGACTTCATTGTTCTTCGTAACATTGATCTTTTCTTTCGCTGCCCCCAGCTCGCGGCTAGGCCTAATGATAAGTGGCTCTTCAACTCTGGGATTATGATCCTAGAGCCATCTCAGTGTTTGTTTGACAACTTGATGAGCAAGCGTTACTCGATTGAATCTTACAATGGTGGGGATCAAGGCTATCTCAATGAGATTTTCACTTGGTGGCATAGACTTACAGTTAAATTGAGCTTTATGAAGTTTTATTATGAAGGTGGGGATGATCGAGGCGTTCCTAAGGACCATTACACAATTCATTTCTTAGGATTGAAGCCATGGTTATGCTATAGAGATTATGATTGCAATTGGGATATAAAAGAACAACATATATTTGCAAGTGATGATGCTCATGCAATTTGGTGGCAAGTGTATGATTCAATCCCGGCTGAATTGCAACCCTATTGTTCGATGACAAAAGAACATGATTCAATGCTCCGAAGAAGAAGAGAAAGCGCTCAGAAGGCTAATCTTTCTGACGGCCATTGGAAGATTGAGATCAAAGATCCTAGACAGTTTCATTTGGTCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196451.p1 GENE.R_Transcript_196451~~R_Transcript_196451.p1 ORF type:5prime_partial len:585 (+),score=78.60,Glyco_transf_8|PF01501.16|2.1e-07 R_Transcript_196451:3-1757(+)
NMGFSKPGLPTNINASPLSSSLSSYQNFIIFSLLMLFFFPLLLFTVVFPNLQIMELICFQTQSPASLAPHINHKVKVPKWLEVIQGPHGQLAQFHKPLKLGLVNFHDTTRFQQINLLHGIVHGVTIGFDMVSSNVTWKKLFPEWINEGTSSNTCPHIPMPEPGKYPRLDVVVVQLPCTTNGKLNKMKEGMRDVQRLQVSLAAGHLVVDQNGIGGSGKDMYVVFVGKCEQMVEIFKCDDLVWHDGEYWVYKPKIDRLKEVISMPVGTCGLAPPYLPAPGSRQLQGNNPKLKKQNKQQKAREAYVTVIHSSERYVCGAIALAQSIRQTNSTKDLVLLADHSISNHSIAGLEAAGWKMKRIERIRSPNATPNAYNRWNYSKLRVWELTDYDKLMFIDSDFIVLRNIDLFFRCPQLAARPNDKWLFNSGIMILEPSQCLFDNLMSKRYSIESYNGGDQGYLNEIFTWWHRLTVKLSFMKFYYEGGDDRGVPKDHYTIHFLGLKPWLCYRDYDCNWDIKEQHIFASDDAHAIWWQVYDSIPAELQPYCSMTKEHDSMLRRRRESAQKANLSDGHWKIEIKDPRQFHLVN*

Click here to download the sequence:
Link to NCBI Protein BLAST